RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FABP2P12104 132 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 ALKBH6Q3KRA9 238 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 UTF1Q5T230 341 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 OR9G1Q8NH87 305 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 H3BRM9 83 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 ACP1P24666 158 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 SAMD5Q5TGI4 173 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 DUSP23Q9BVJ7 150 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 KCNIP1Q9NZI2 227 aa12.4□□□□□ -0.43
CIRBP-228ENST00000590347 ROS1P08922 2347 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 IGKV1OR2-108A0A075B7D4 117 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 SEC11AP67812 179 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 LOXL1Q08397 574 aaPredicted RBP12.39□□□□□ -0.43
CIRBP-228ENST00000590347 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 ANKRD30BLA7E2S9 258 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 OR5AL1P0C617 328 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 KLF5Q13887 457 aaPredicted RBP12.39□□□□□ -0.43
CIRBP-228ENST00000590347 OR10D3Q8NH80 312 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 POM121L2Q96KW2 1035 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 CHRNA10Q9GZZ6 450 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
CIRBP-228ENST00000590347 FOXF2Q12947 444 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 COX19Q49B96 90 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 WDR86Q86TI4 376 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 SMPXQ9UHP9 88 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 AMMECR1Q9Y4X0 333 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-228ENST00000590347 MPC1Q9Y5U8 109 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 PCNX2A6NKB5 2137 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 RFPL3SP0C7P2 107 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 PROK2Q9HC23 129 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 ZNF257Q9Y2Q1 563 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 LY96Q9Y6Y9 160 aa12.38□□□□□ -0.43
CIRBP-228ENST00000590347 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 KALRNO60229 2985 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 KLF7O75840 302 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-228ENST00000590347 ANXA2RQ3ZCQ2 193 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 FADS6Q8N9I5 356 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 CADP27708 2225 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-228ENST00000590347 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-228ENST00000590347 GNG3P63215 75 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-228ENST00000590347 RNFT1Q5M7Z0 435 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 PSMB11A5LHX3 300 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 H3BMG7 143 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 NKX2-8O15522 239 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 PROP1O75360 226 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 FXYD2P54710 66 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 SPAG8Q99932 426 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-228ENST00000590347 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
CIRBP-228ENST00000590347 NCKAP5O14513 1909 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 A8MWL6 223 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 PRSS46E5RG02 174 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 C1orf210Q8IVY1 113 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 GTSF1Q8WW33 167 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 A1L4Q6 167 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 MPDU1O75352 247 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 FGF6P10767 208 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 CACNG7P62955 275 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 HBBP68871 147 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
CIRBP-228ENST00000590347 C20orf78Q9BR46 151 aa12.36□□□□□ -0.43
CIRBP-228ENST00000590347 DSCAML1Q8TD84 2053 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 LIFP15018 202 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 VDAC2P45880 294 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-228ENST00000590347 PCBD1P61457 104 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 C3AR1Q16581 482 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 OR13A1Q8NGR1 328 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 LIPFP07098 398 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 SSBP2P81877 361 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-228ENST00000590347 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 TMEM140Q9NV12 185 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 RIF1Q5UIP0 2472 aaKnown RBP12.35□□□□□ -0.43
CIRBP-228ENST00000590347 CSMD1Q96PZ7 3565 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 SERTM2A0A1B0GWG4 89 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 ADTRPQ96IZ2 230 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
CIRBP-228ENST00000590347 NHP2Q9NX24 153 aaKnown RBP12.35□□□□□ -0.43
CIRBP-228ENST00000590347 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 FTH1P19P0C7X4 201 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 TAAR6Q96RI8 345 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 AGRNO00468 2067 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 KBTBD11-OT1A0A1B0GTJ5 212 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 CYC1P08574 325 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 GPR12P47775 334 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms