RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PFDN1O60925 122 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 CCNKO75909 580 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 NXPH3O95157 252 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 TRBV12-3P01733 135 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 IFNA4P05014 189 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 HTR2BP41595 481 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 CAV2P51636 162 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 BRWD1-AS2P59051 145 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 TPPP2P59282 170 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 FCN2Q15485 313 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 IZUMO4Q1ZYL8 232 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 LRRC37A5PQ49AS3 106 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 AKIRIN2Q53H80 203 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 FAM209BQ5JX69 171 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 ETFRF1Q6IPR1 90 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 Q6ZR54 194 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 INO80EQ8NBZ0 244 aaPredicted RBP4.49□□□□□ -1.69
VPS25-204ENST00000589577 OR2T35Q8NGX2 323 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 PPP1R1CQ8WVI7 109 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 WDR89Q96FK6 387 aaPredicted RBP4.49□□□□□ -1.69
VPS25-204ENST00000589577 C18orf15Q96N68 181 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 SLC25A31Q9H0C2 315 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 RANGRFQ9HD47 186 aaPredicted RBP4.49□□□□□ -1.69
VPS25-204ENST00000589577 HSPB7Q9UBY9 170 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 FBXL17Q9UF56 701 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
VPS25-204ENST00000589577 U3KQ87 197 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 TRAV3A0A0B4J244 114 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 A0A0B4J293 547 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 A0A0G2JLM5 398 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 A0A0G2JRQ6 117 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 TEX50A0A1B0GTY4 177 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 NPIPB5A8MRT5 1133 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 IGLL5B9A064 214 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 H3BUA1 57 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SIX6O95475 246 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 CRYGBP07316 175 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 P0C879 139 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 IAPPP10997 89 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 C4BPBP20851 252 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 NPY1RP25929 384 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 PSMB6P28072 239 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 TAS2R30P59541 319 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 HBG1P69891 147 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 HBG2P69892 147 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 DEFA5Q01523 94 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 PJVKQ0ZLH3 352 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 EXOSC2Q13868 293 aaKnown RBP4.48□□□□□ -1.69
VPS25-204ENST00000589577 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SPINK9Q5DT21 86 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SPANXN5Q5MJ07 72 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SLC25A24Q6NUK1 477 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 LFNGQ8NES3 379 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SLC24A4Q8NFF2 622 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 OR4D5Q8NGN0 318 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 OR10C1Q96KK4 312 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 FAM103A1Q9BTL3 118 aaKnown RBP4.48□□□□□ -1.69
VPS25-204ENST00000589577 MAGT1Q9H0U3 335 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 RBKSQ9H477 322 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SLA2Q9H6Q3 261 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 NDUFA4L2Q9NRX3 87 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 PSENENQ9NZ42 101 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 FBXL7Q9UJT9 491 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 SELENOKQ9Y6D0 94 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 NACAE9PAV3 2078 aa4.48□□□□□ -1.69
VPS25-204ENST00000589577 FXYD6-FXYD2A0A087WZ82 144 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 FAM223BA6NKX1 122 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 MPTX1A8MV57 137 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 EPM2AB3EWF7 344 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 INS-IGF2F8WCM5 200 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 K7EPK0 472 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 FCN1O00602 326 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 TSC22D2O75157 780 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 PITX3O75364 302 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
VPS25-204ENST00000589577 FABP1P07148 127 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
VPS25-204ENST00000589577 APELAP0DMC3 54 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 OPRK1P41145 380 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 H2BFSP57053 126 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 POLR2GP62487 172 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS25-204ENST00000589577 ID3Q02535 119 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 TNP2Q05952 138 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 RAB32Q13637 225 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 GUCA2BQ16661 112 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 DEFB114Q30KQ6 69 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 AARDQ4LEZ3 155 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 PRSS54Q6PEW0 395 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 FAM223AQ8IWN6 122 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 LILRB2Q8N423 598 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 OR2C3Q8N628 320 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 OR11H7Q8NGC8 314 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 OR10P1Q8NGE3 313 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 OR1P1Q8NH06 330 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 C11orf45Q8TAV5 145 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 PINX1Q96BK5 328 aaKnown RBP4.47□□□□□ -1.69
VPS25-204ENST00000589577 MISP3Q96FF7 219 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 SLC35E1Q96K37 410 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms