RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 MPDU1O75352 247 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 CLEC3BP05452 202 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 OR10J1P30954 320 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 FCGR2BP31994 310 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-210ENST00000588618 EIF5AP63241 154 aaKnown RBP17.53■□□□□ 0.4
ACTN4-210ENST00000588618 AWAT1Q58HT5 328 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 TCTEX1D4Q5JR98 221 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 HIST2H2BDQ6DRA6 164 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 BTNL8Q6UX41 500 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 TMEM158Q8WZ71 300 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 ATP6V0BQ99437 205 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 C19orf24Q9BVV8 132 aa17.53■□□□□ 0.4
ACTN4-210ENST00000588618 CDX1P47902 265 aaPredicted RBP17.52■□□□□ 0.4
ACTN4-210ENST00000588618 LURAP1LQ8IV03 231 aa17.52■□□□□ 0.4
ACTN4-210ENST00000588618 ZNF709Q8N972 641 aa17.52■□□□□ 0.4
ACTN4-210ENST00000588618 CCDC140Q96MF4 163 aa17.52■□□□□ 0.4
ACTN4-210ENST00000588618 WDR61Q9GZS3 305 aaKnown RBP17.52■□□□□ 0.4
ACTN4-210ENST00000588618 GNB4Q9HAV0 340 aa17.52■□□□□ 0.4
ACTN4-210ENST00000588618 WDR83OSQ9Y284 106 aa17.52■□□□□ 0.4
ACTN4-210ENST00000588618 NUDT19A8MXV4 375 aa17.52■□□□□ 0.39
ACTN4-210ENST00000588618 ZNF343Q6P1L6 599 aa17.52■□□□□ 0.39
ACTN4-210ENST00000588618 LSM4Q9Y4Z0 139 aaKnown RBP17.52■□□□□ 0.39
ACTN4-210ENST00000588618 TSSC4Q9Y5U2 329 aaPredicted RBP17.52■□□□□ 0.39
ACTN4-210ENST00000588618 RFNGQ9Y644 331 aa17.52■□□□□ 0.39
ACTN4-210ENST00000588618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.51■□□□□ 0.39
ACTN4-210ENST00000588618 ANKRD34BA5PLL1 514 aa17.51■□□□□ 0.39
ACTN4-210ENST00000588618 WFDC12Q8WWY7 111 aa17.51■□□□□ 0.39
ACTN4-210ENST00000588618 CITED2Q99967 270 aaPredicted RBP17.51■□□□□ 0.39
ACTN4-210ENST00000588618 IGKV1D-37A0A075B6S9 117 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 C17orf112F2Z3M2 114 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 FABP1P07148 127 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 LGALS1P09382 135 aaKnown RBP17.5■□□□□ 0.39
ACTN4-210ENST00000588618 RUNX1Q01196 453 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 SPSB3Q6PJ21 355 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 SLC51BQ86UW2 128 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 THAP8Q8NA92 274 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 HSD17B11Q8NBQ5 300 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 KLHL30-AS1Q8NEE0 82 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 PARD6GQ9BYG4 376 aaPredicted RBP17.5■□□□□ 0.39
ACTN4-210ENST00000588618 PEF1Q9UBV8 284 aaKnown RBP17.5■□□□□ 0.39
ACTN4-210ENST00000588618 TGOLN2O43493 480 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 IGLC1P0CG04 106 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 ARL3P36405 182 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 CAMLGP49069 296 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 C4orf3Q8WVX3 66 aa17.5■□□□□ 0.39
ACTN4-210ENST00000588618 AGPAT2O15120 278 aa17.49■□□□□ 0.39
ACTN4-210ENST00000588618 TPT1P13693 172 aaKnown RBP17.49■□□□□ 0.39
ACTN4-210ENST00000588618 TRGV9Q99603 122 aa17.49■□□□□ 0.39
ACTN4-210ENST00000588618 MGST2Q99735 147 aa17.49■□□□□ 0.39
ACTN4-210ENST00000588618 NPCDR1Q9BY65 106 aa17.49■□□□□ 0.39
ACTN4-210ENST00000588618 ARV1Q9H2C2 271 aa17.49■□□□□ 0.39
ACTN4-210ENST00000588618 A0A1W2PRX2 142 aa17.48■□□□□ 0.39
ACTN4-210ENST00000588618 KCNIP2Q9NS61 270 aa17.48■□□□□ 0.39
ACTN4-210ENST00000588618 PPP5D1E7EU14 171 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 CTSGP08311 255 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 RELQ04864 619 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-210ENST00000588618 TIGITQ495A1 244 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 STOML3Q8TAV4 291 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 GNPNAT1Q96EK6 184 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-210ENST00000588618 RSG1Q9BU20 258 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 SH3BGRL3Q9H299 93 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 SELENOTP62341 195 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 ZNF90Q03938 601 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 CYP2G1PQ6ZSU1 146 aa17.47■□□□□ 0.39
ACTN4-210ENST00000588618 CFDP00746 253 aaPredicted RBP17.46■□□□□ 0.39
ACTN4-210ENST00000588618 TRBV12-3P01733 135 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 ATP6V0CP27449 155 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 KRTAP10-3P60369 221 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 ZNF616Q08AN1 781 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 TMEM182Q6ZP80 229 aaPredicted RBP17.46■□□□□ 0.39
ACTN4-210ENST00000588618 C18orf65Q6ZTR6 163 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 BAP18Q8IXM2 172 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 ST8SIA2Q92186 375 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 ZNF414Q96IQ9 312 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 CHRDL1Q9BU40 450 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 GGTLC1Q9BX51 225 aa17.46■□□□□ 0.39
ACTN4-210ENST00000588618 I3L521 148 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 GGCTO75223 188 aaKnown RBP17.45■□□□□ 0.38
ACTN4-210ENST00000588618 IGKV1-17P01599 117 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 RD3LP0DJH9 198 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 YPEL3P61236 119 aaPredicted RBP17.45■□□□□ 0.38
ACTN4-210ENST00000588618 BPIFCQ8NFQ6 507 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 Q8WTZ3 238 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 GINS3Q9BRX5 216 aa17.45■□□□□ 0.38
ACTN4-210ENST00000588618 HSPB1P04792 205 aaKnown RBP17.44■□□□□ 0.38
ACTN4-210ENST00000588618 ADMP35318 185 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 C8orf86Q6ZUL3 223 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 DPF1Q92782 380 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 IGHV3-35A0A0C4DH35 117 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 YIF1AO95070 293 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 TOMM40O96008 361 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 GATA2P23769 480 aaPredicted RBP17.44■□□□□ 0.38
ACTN4-210ENST00000588618 RPEL1Q2QD12 228 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 NSUN5P1Q3KNT7 163 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 EIF5AL1Q6IS14 154 aaKnown RBP17.44■□□□□ 0.38
ACTN4-210ENST00000588618 ZNF600Q6ZNG1 722 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 Q6ZRG5 221 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 NDUFA11Q86Y39 141 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 SLC25A32Q9H2D1 315 aa17.44■□□□□ 0.38
ACTN4-210ENST00000588618 TIMM9Q9Y5J7 89 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms