RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PRR20CP86479 221 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 PRR20DP86480 221 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 PRR20BP86481 221 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 PRR20AP86496 221 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 DHRS2Q13268 280 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
ERCC1-206ENST00000588300 CTF1Q16619 201 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 Q8WTZ3 238 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 RBPMSQ93062 196 aaKnown RBP11.56□□□□□ -0.56
ERCC1-206ENST00000588300 NAA50Q9GZZ1 169 aaKnown RBP11.56□□□□□ -0.56
ERCC1-206ENST00000588300 U3KQE9 123 aa11.56□□□□□ -0.56
ERCC1-206ENST00000588300 TEX13DA0A0J9YY54 714 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-206ENST00000588300 GABARAPH6UMI1 98 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
ERCC1-206ENST00000588300 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 HLA-DMBP28068 263 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 RND2P52198 227 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 AP2S1P53680 142 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-206ENST00000588300 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
ERCC1-206ENST00000588300 MEF2DQ14814 521 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
ERCC1-206ENST00000588300 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 NAA60Q9H7X0 242 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 CACNG5Q9UF02 275 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 X6R8D5 127 aa11.55□□□□□ -0.56
ERCC1-206ENST00000588300 DNAH6Q9C0G6 4158 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 TRAV10A0A0B4J240 114 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 OR10J1P30954 320 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 YPEL3P61236 119 aaPredicted RBP11.54□□□□□ -0.56
ERCC1-206ENST00000588300 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
ERCC1-206ENST00000588300 DHODHQ02127 395 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
ERCC1-206ENST00000588300 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 GPR107Q5VW38 600 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 FAAP20Q6NZ36 180 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 SELENOHQ8IZQ5 122 aaKnown RBP11.54□□□□□ -0.56
ERCC1-206ENST00000588300 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 RTBDNQ9BSG5 229 aaPredicted RBP11.54□□□□□ -0.56
ERCC1-206ENST00000588300 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
ERCC1-206ENST00000588300 DISC1C4P0D8 188 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 RGS5O15539 181 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 TMEM268Q5VZI3 342 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 Q6ZTC4 211 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 GPR146Q96CH1 333 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
ERCC1-206ENST00000588300 HECTD4Q9Y4D8 3996 aa11.52□□□□□ -0.56
ERCC1-206ENST00000588300 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
ERCC1-206ENST00000588300 IL4P05112 153 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
ERCC1-206ENST00000588300 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
ERCC1-206ENST00000588300 NOXA1Q86UR1 476 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 CSNK1G2-AS1Q8NCQ2 148 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 C1QTNF4Q9BXJ3 329 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 HERC2O95714 4834 aa11.52□□□□□ -0.57
ERCC1-206ENST00000588300 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 CRYM-AS1A6NIL9 109 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 GSTZ1O43708 216 aaPredicted RBP11.51□□□□□ -0.57
ERCC1-206ENST00000588300 NPY1RP25929 384 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
ERCC1-206ENST00000588300 TMEM170AQ8WVE7 144 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 SMIM4Q8WVI0 70 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 NPIPB3Q92617 1050 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
ERCC1-206ENST00000588300 NRN1Q9NPD7 142 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 GPR132Q9UNW8 380 aa11.51□□□□□ -0.57
ERCC1-206ENST00000588300 FAM90A26D6RGX4 464 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 NXPH3O95157 252 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 TOMM40O96008 361 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 ACY3Q96HD9 319 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 PRRT1Q99946 306 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 RNF126Q9BV68 326 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 TMEM56-RWDD3S4R434 201 aa11.5□□□□□ -0.57
ERCC1-206ENST00000588300 BUB3O43684 328 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 KRTAP17-1Q9BYP8 105 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
ERCC1-206ENST00000588300 CTDSP2O14595 271 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 CTDSPLO15194 276 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 IFNA10P01566 189 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms