RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PRSS54Q6PEW0 395 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 CLVS1Q8IUQ0 354 aaPredicted RBP13.71□□□□□ -0.21
TRIM47-205ENST00000587774 OR51S1Q8NGJ8 323 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 TMEM170AQ8WVE7 144 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 DIRAS2Q96HU8 199 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 DEFB4AO15263 64 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 ZNF688P0C7X2 276 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 TRPT1Q86TN4 253 aaKnown RBP13.7□□□□□ -0.22
TRIM47-205ENST00000587774 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 DYNC2LI1Q8TCX1 351 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
TRIM47-205ENST00000587774 DCANP1Q8TF63 244 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 GRAMD2BQ96HH9 432 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
TRIM47-205ENST00000587774 PRRT1Q99946 306 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 PRR13Q9NZ81 148 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
TRIM47-205ENST00000587774 FBXL17Q9UF56 701 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
TRIM47-205ENST00000587774 ANKRD20A5PA0PJZ0 165 aa13.69□□□□□ -0.22
TRIM47-205ENST00000587774 OR1S2Q8NGQ3 325 aa13.69□□□□□ -0.22
TRIM47-205ENST00000587774 RAB2BQ8WUD1 216 aa13.69□□□□□ -0.22
TRIM47-205ENST00000587774 MFFQ9GZY8 342 aa13.69□□□□□ -0.22
TRIM47-205ENST00000587774 U3KQE9 123 aa13.69□□□□□ -0.22
TRIM47-205ENST00000587774 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
TRIM47-205ENST00000587774 SLC25A4P12235 298 aa13.68□□□□□ -0.22
TRIM47-205ENST00000587774 C4BPBP20851 252 aa13.68□□□□□ -0.22
TRIM47-205ENST00000587774 NPY1RP25929 384 aa13.68□□□□□ -0.22
TRIM47-205ENST00000587774 OR10J1P30954 320 aa13.68□□□□□ -0.22
TRIM47-205ENST00000587774 RPP25LQ8N5L8 163 aaKnown RBP13.68□□□□□ -0.22
TRIM47-205ENST00000587774 Q8NAQ8 132 aa13.68□□□□□ -0.22
TRIM47-205ENST00000587774 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM47-205ENST00000587774 SULT1A3P0DMM9 295 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 SULT1A4P0DMN0 295 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
TRIM47-205ENST00000587774 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 Q8WTZ3 238 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 IL22RA2Q969J5 263 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
TRIM47-205ENST00000587774 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
TRIM47-205ENST00000587774 GSTZ1O43708 216 aaPredicted RBP13.66□□□□□ -0.22
TRIM47-205ENST00000587774 DEDDO75618 318 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 IL4P05112 153 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 SPP1P10451 314 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
TRIM47-205ENST00000587774 C16orf54Q6UWD8 224 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 ACY3Q96HD9 319 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 HECTD4Q9Y4D8 3996 aa13.66□□□□□ -0.22
TRIM47-205ENST00000587774 HELTA6NFD8 242 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
TRIM47-205ENST00000587774 TMBIM6P55061 237 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 SUPT4H1P63272 117 aaKnown RBP13.65□□□□□ -0.22
TRIM47-205ENST00000587774 DHRS2Q13268 280 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 ACTL10Q5JWF8 245 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 LGALS9CQ6DKI2 356 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 ETFRF1Q6IPR1 90 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
TRIM47-205ENST00000587774 NPIPB3Q92617 1050 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 BCL7BQ9BQE9 202 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
TRIM47-205ENST00000587774 MCUBQ9NWR8 336 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 SCP2D1Q9UJQ7 156 aa13.65□□□□□ -0.22
TRIM47-205ENST00000587774 IFNA4P05014 189 aa13.64□□□□□ -0.23
TRIM47-205ENST00000587774 TMEM41BQ5BJD5 291 aa13.64□□□□□ -0.23
TRIM47-205ENST00000587774 PSMG4Q5JS54 123 aa13.64□□□□□ -0.23
TRIM47-205ENST00000587774 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
TRIM47-205ENST00000587774 RSL24D1Q9UHA3 163 aaKnown RBP13.64□□□□□ -0.23
TRIM47-205ENST00000587774 KCNIP3Q9Y2W7 256 aa13.64□□□□□ -0.23
TRIM47-205ENST00000587774 A0A0B4J2A0 478 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 IGHV4-28A0A0C4DH34 117 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 TOMM40O96008 361 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 IFNA10P01566 189 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 RBMY1A1P0DJD3 496 aaKnown RBP13.63□□□□□ -0.23
TRIM47-205ENST00000587774 RBMY1CP0DJD4 496 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 AKR1C4P17516 323 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 SMCO1Q147U7 214 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 RBMY1FQ15415 496 aaKnown RBP13.63□□□□□ -0.23
TRIM47-205ENST00000587774 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 NOXA1Q86UR1 476 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 DTD1Q8TEA8 209 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 CLEC5AQ9NY25 188 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 CACFD1Q9UGQ2 172 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 SHPKQ9UHJ6 478 aa13.63□□□□□ -0.23
TRIM47-205ENST00000587774 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
TRIM47-205ENST00000587774 H3BMQ9 156 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 CCR6P51684 374 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
TRIM47-205ENST00000587774 C2CD4CQ8TF44 421 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 SCGB3A2Q96PL1 93 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 SOSTQ9BQB4 213 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 RBKSQ9H477 322 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 X6R8D5 127 aa13.62□□□□□ -0.23
TRIM47-205ENST00000587774 FAM90A26D6RGX4 464 aa13.61□□□□□ -0.23
TRIM47-205ENST00000587774 BUB3O43684 328 aa13.61□□□□□ -0.23
TRIM47-205ENST00000587774 RD3LP0DJH9 198 aa13.61□□□□□ -0.23
TRIM47-205ENST00000587774 PSG1P11464 419 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms