RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CSNK1G2-AS1Q8NCQ2 148 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 OR1S2Q8NGQ3 325 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 GLMPQ8WWB7 406 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 TMEM222Q9H0R3 208 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 TBC1D24Q9ULP9 559 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 TRAV10A0A0B4J240 114 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 CDS2O95674 445 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 RAB3DO95716 219 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 HNRNPCP07910 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAF4-216ENST00000586813 OR5AC1P0C628 307 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 RND2P52198 227 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 C16orf54Q6UWD8 224 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 LHFPL5Q8TAF8 219 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 Q8WTZ3 238 aa13.99□□□□□ -0.17
TRAF4-216ENST00000586813 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-216ENST00000586813 KIAA1109Q2LD37 5005 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 IGHV4-4A0A075B6R2 117 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 SLC25A4P12235 298 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 ZNF182P17025 639 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 OR10J1P30954 320 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 AP2S1P53680 142 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 C2orf83Q53S99 150 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 CENPSQ8N2Z9 138 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 SLC24A4Q8NFF2 622 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 RNASEH2CQ8TDP1 164 aaKnown RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 GLYATL2Q8WU03 294 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 C15orf40Q8WUR7 153 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 RBPMSQ93062 196 aaKnown RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 RAB40CQ96S21 281 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 NAA60Q9H7X0 242 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 HEYLQ9NQ87 328 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-216ENST00000586813 CACNG5Q9UF02 275 aa13.98□□□□□ -0.17
TRAF4-216ENST00000586813 FAT2Q9NYQ8 4349 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 GABARAPO95166 117 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 YPEL3P61236 119 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-216ENST00000586813 DHODHQ02127 395 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-216ENST00000586813 CTF1Q16619 201 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 FAAP20Q6NZ36 180 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 CELA1Q9UNI1 258 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 C14orf166Q9Y224 244 aaKnown RBP13.97□□□□□ -0.17
TRAF4-216ENST00000586813 PCLOQ9Y6V0 5065 aa13.97□□□□□ -0.17
TRAF4-216ENST00000586813 TEX13DA0A0J9YY54 714 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-216ENST00000586813 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
TRAF4-216ENST00000586813 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.17
TRAF4-216ENST00000586813 RTBDNQ9BSG5 229 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-216ENST00000586813 RNF126Q9BV68 326 aa13.96□□□□□ -0.17
TRAF4-216ENST00000586813 CEBPZOSA8MTT3 80 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 FAM90A26D6RGX4 464 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 GABARAPH6UMI1 98 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 AMBPP02760 352 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 IL4P05112 153 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
TRAF4-216ENST00000586813 MEF2DQ14814 521 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 GPR107Q5VW38 600 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 TMEM268Q5VZI3 342 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 GPR146Q96CH1 333 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 NRN1Q9NPD7 142 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 DNAH2Q9P225 4427 aa13.95□□□□□ -0.18
TRAF4-216ENST00000586813 SSBP1Q04837 148 aaKnown RBP13.94□□□□□ -0.18
TRAF4-216ENST00000586813 SURF2Q15527 256 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-216ENST00000586813 C12orf74Q32Q52 190 aa13.94□□□□□ -0.18
TRAF4-216ENST00000586813 ETFRF1Q6IPR1 90 aa13.94□□□□□ -0.18
TRAF4-216ENST00000586813 C1QTNF4Q9BXJ3 329 aa13.94□□□□□ -0.18
TRAF4-216ENST00000586813 MIXL1Q9H2W2 232 aa13.94□□□□□ -0.18
TRAF4-216ENST00000586813 SEPSECSQ9HD40 501 aaKnown RBP13.94□□□□□ -0.18
TRAF4-216ENST00000586813 CRYM-AS1A6NIL9 109 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 BUB3O43684 328 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 NXPH3O95157 252 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 TOMM40O96008 361 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 NPY1RP25929 384 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 NUTF2P61970 127 aaKnown RBP13.93□□□□□ -0.18
TRAF4-216ENST00000586813 MRPS10P82664 201 aaKnown RBP13.93□□□□□ -0.18
TRAF4-216ENST00000586813 SIGLEC15Q6ZMC9 328 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 ZNF767PQ75MW2 155 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 NPIPB3Q92617 1050 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 ACY3Q96HD9 319 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 XCL2Q9UBD3 114 aa13.93□□□□□ -0.18
TRAF4-216ENST00000586813 DEFB131BA0A096LNP1 70 aa13.92□□□□□ -0.18
TRAF4-216ENST00000586813 H3BMM0 161 aa13.92□□□□□ -0.18
TRAF4-216ENST00000586813 GSTZ1O43708 216 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-216ENST00000586813 RD3LP0DJH9 198 aa13.92□□□□□ -0.18
TRAF4-216ENST00000586813 PKHD1P08F94 4074 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 DISC1C4P0D8 188 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 HLA-DRB4P13762 266 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 NMSQ5H8A3 153 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 LINC00336Q6ZUF6 198 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 NOXA1Q86UR1 476 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 CACFD1Q9UGQ2 172 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 GPR132Q9UNW8 380 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 TMEM56-RWDD3S4R434 201 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 HLA-DRB4X5D2U9 266 aa13.91□□□□□ -0.18
TRAF4-216ENST00000586813 RGS5O15539 181 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 SMIM18P0DKX4 95 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 SULT1A3P0DMM9 295 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 SULT1A4P0DMN0 295 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms