RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CYP2G1PQ6ZSU1 146 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 TMEM116Q8NCL8 245 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 ZNF48Q96MX3 618 aaPredicted RBP16.1■□□□□ 0.17
ATG4D-204ENST00000586417 RASL11BQ9BPW5 248 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 INAFM1C9JVW0 142 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 BCL2P10415 239 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 GUCA2BQ16661 112 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 TMPRSS5Q9H3S3 457 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 NF1P21359 2839 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 IGHV3-21A0A0B4J1V1 117 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 A0A1W2PPV4 95 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 HNF1AP20823 631 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 KHDC3LQ587J8 217 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 TTC9CQ8N5M4 171 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 C5orf56Q8N8D9 126 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 OR1L6Q8NGR2 347 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 RBM14Q96PK6 669 aaKnown RBP16.09■□□□□ 0.17
ATG4D-204ENST00000586417 SLC35B3Q9H1N7 401 aa16.09■□□□□ 0.17
ATG4D-204ENST00000586417 TCRBV4S1A1TA0A5B7 111 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 ZFP92A6NM28 416 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 DEFA5Q01523 94 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 ATRAIDQ6UW56 229 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 TMEM219Q86XT9 240 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 TEX29Q8N6K0 151 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 RXFP4Q8TDU9 374 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 SSX3Q99909 188 aa16.08■□□□□ 0.17
ATG4D-204ENST00000586417 SEPSECSQ9HD40 501 aaKnown RBP16.08■□□□□ 0.17
ATG4D-204ENST00000586417 PSMB11A5LHX3 300 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 K7EIM0 57 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 HSPB1P04792 205 aaKnown RBP16.08■□□□□ 0.16
ATG4D-204ENST00000586417 SRP19P09132 144 aaKnown RBP16.08■□□□□ 0.16
ATG4D-204ENST00000586417 STAG3L2P0CL84 134 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 STAG3L3P0CL85 134 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 ZNF90Q03938 601 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 SPATA31B1PQ5VZV4 182 aa16.08■□□□□ 0.16
ATG4D-204ENST00000586417 FANCD2OSQ96PS1 177 aa16.07■□□□□ 0.16
ATG4D-204ENST00000586417 MOB4Q9Y3A3 225 aa16.07■□□□□ 0.16
ATG4D-204ENST00000586417 IGLV11-55A0A075B6I3 123 aa16.06■□□□□ 0.16
ATG4D-204ENST00000586417 AMY1AP04745 511 aa16.06■□□□□ 0.16
ATG4D-204ENST00000586417 RHOBP62745 196 aa16.06■□□□□ 0.16
ATG4D-204ENST00000586417 TRGV9Q99603 122 aa16.06■□□□□ 0.16
ATG4D-204ENST00000586417 TSPAN9O75954 239 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 IFNA1P01562 189 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 SLC35E3Q7Z769 313 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 SVBPQ8N300 66 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 TNFRSF19Q9NS68 423 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 CDC42EP3Q9UKI2 254 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 A6NDX4 124 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 SH2D7A6NKC9 451 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-204ENST00000586417 H3BUX3 64 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 IGHV4-59P01825 116 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 SELENOTP62341 195 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 OR4X1Q8NH49 305 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 GATAD1Q8WUU5 269 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 TMEM37Q8WXS4 190 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 VAX2Q9UIW0 290 aa16.05■□□□□ 0.16
ATG4D-204ENST00000586417 ATP6V0E1O15342 81 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 OR5G3P0C626 314 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 ARL14EPLP0DKL9 152 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 SRD5A1P18405 259 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 RBMS3Q6XE24 437 aaKnown RBP16.04■□□□□ 0.16
ATG4D-204ENST00000586417 Q6YL49 198 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 SIGLECL1Q8N7X8 197 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 C19orf24Q9BVV8 132 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 FUT9Q9Y231 359 aa16.04■□□□□ 0.16
ATG4D-204ENST00000586417 LINC01548A6NM66 108 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 IGLC1P0CG04 106 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 IER3P46695 156 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 PSMB3P49720 205 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 LY6EQ16553 131 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 MIR17HGQ75NE6 70 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 CYB561D1Q8N8Q1 229 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 PRDM13Q9H4Q3 707 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 MANBALQ9NQG1 85 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 CXorf1O96002 111 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 IQCF2Q8IXL9 164 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 OR5T1Q8NG75 326 aa16.03■□□□□ 0.16
ATG4D-204ENST00000586417 KLK9Q2XQG4 91 aa16.02■□□□□ 0.15
ATG4D-204ENST00000586417 PATE2Q6UY27 113 aa16.02■□□□□ 0.15
ATG4D-204ENST00000586417 FAM110DQ8TAY7 271 aaPredicted RBP16.02■□□□□ 0.15
ATG4D-204ENST00000586417 KLK9Q9UKQ9 250 aa16.02■□□□□ 0.15
ATG4D-204ENST00000586417 CD81P60033 236 aa16.01■□□□□ 0.15
ATG4D-204ENST00000586417 MEF2BQ02080 365 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-204ENST00000586417 SOHLH1Q5JUK2 328 aa16.01■□□□□ 0.15
ATG4D-204ENST00000586417 NKX6-2Q9C056 277 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-204ENST00000586417 HOXA3O43365 443 aaPredicted RBP16■□□□□ 0.15
ATG4D-204ENST00000586417 CLN5O75503 358 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 TAGLN2P37802 199 aaKnown RBP16■□□□□ 0.15
ATG4D-204ENST00000586417 UNQ5815/PRO19632Q6UWF5 114 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 DUX5Q96PT3 197 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 DNAJC4Q9NNZ3 241 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 PITPNC1Q9UKF7 332 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 PAGE4O60829 102 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 IGKV1-17P01599 117 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 GCHFRP30047 84 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 NPBWR1P48145 328 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 ECSCRQ19T08 205 aa16■□□□□ 0.15
ATG4D-204ENST00000586417 MORN5Q5VZ52 161 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms