RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, human

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-205	ENST00000586039	TMEM222	Q9H0R3	208 aa		11.17	□□□□□ -0.62
PKN1-205	ENST00000586039	SCP2D1	Q9UJQ7	156 aa		11.17	□□□□□ -0.62
PKN1-205	ENST00000586039	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.16	□□□□□ -0.62
PKN1-205	ENST00000586039		K7EMT4	169 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	SUPT4H1	P63272	117 aa	Known RBP	11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	SURF2	Q15527	256 aa	Predicted RBP	11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	TMEM41B	Q5BJD5	291 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	TMEM268	Q5VZI3	342 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	RNASE11	Q8TAA1	199 aa	Known RBP	11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	RNF2	Q99496	336 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	TSC22D3	Q99576	134 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	THYN1	Q9P016	225 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	CELA1	Q9UNI1	258 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	F11R	Q9Y624	299 aa	Known RBP	11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	VPS13B	Q7Z7G8	4022 aa		11.16	□□□□□ -0.62
PKN1-205	ENST00000586039	NACA	E9PAV3	2078 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	IGKV3-7	A0A075B6H7	116 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	NDUFA4	O00483	81 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	ZNF207	O43670	478 aa	Known RBP	11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	CDS2	O95674	445 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	HSPE1	P61604	102 aa	Known RBP	11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	CADM3	Q8N126	398 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	SRSF8	Q9BRL6	282 aa	Known RBP	11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	FKBP11	Q9NYL4	201 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	NDUFA13	Q9P0J0	144 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039	FLVCR2	Q9UPI3	526 aa		11.15	□□□□□ -0.62
PKN1-205	ENST00000586039		A6NHS1	94 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039		K7EIM0	57 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	FGF2	P09038	288 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	PAFAH1B2	P68402	229 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	PRCD	Q00LT1	54 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	CNPY1	Q3B7I2	92 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	LYZL2	Q7Z4W2	148 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	STH	Q8IWL8	128 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	RRNAD1	Q96FB5	475 aa	Known RBP	11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	MISP3	Q96FF7	219 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039		X6R8D5	127 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	FAT1	Q14517	4588 aa		11.14	□□□□□ -0.63
PKN1-205	ENST00000586039	IGHV3OR16-8	A0A075B7F1	116 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	OR2T8	A6NH00	312 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039		F8W735	103 aa	Predicted RBP	11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	AP3S2	P59780	193 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	DHODH	Q02127	395 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	MLANA	Q16655	118 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	LEMD1	Q68G75	181 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	SPATA12	Q7Z6I5	190 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	GBGT1	Q8N5D6	347 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	SLC35G3	Q8N808	338 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	UBAC2	Q8NBM4	344 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	SCARB1	Q8WTV0	552 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	RBPMS	Q93062	196 aa	Known RBP	11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	BSCL2	Q96G97	398 aa	Predicted RBP	11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	FAM210B	Q96KR6	192 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	TMEM56	Q96MV1	263 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	RHPN1-AS1	Q9BWJ2	59 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	CACNG5	Q9UF02	275 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	SMPX	Q9UHP9	88 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	TBC1D24	Q9ULP9	559 aa		11.13	□□□□□ -0.63
PKN1-205	ENST00000586039	C15orf62	A8K5M9	175 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	IL7	P13232	177 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	FAU	P35544	74 aa	Known RBP	11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	TRIQK	Q629K1	86 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	SPSB3	Q6PJ21	355 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	C6orf223	Q8N319	242 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	VN1R17P	Q8TDU5	208 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	PINX1	Q96BK5	328 aa	Known RBP	11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	ZNF414	Q96IQ9	312 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039	TMEM56-RWDD3	S4R434	201 aa		11.12	□□□□□ -0.63
PKN1-205	ENST00000586039		I3L2K1	104 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	CHEK1	O14757	476 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	DFFB	O76075	338 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	MT-CO2	P00403	227 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	GIG44	P09565	113 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	BTC	P35070	178 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	INPP1	P49441	399 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	HOXA1	P49639	335 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	DEFB131A	P59861	70 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	PPP1R1A	Q13522	171 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	THOC7	Q6I9Y2	204 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	MORN3	Q6PF18	240 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	TMEM116	Q8NCL8	245 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	OR1P1	Q8NH06	330 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	SCGB3A2	Q96PL1	93 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	C21orf62	Q9NYP8	219 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	KCNIP3	Q9Y2W7	256 aa		11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	FLG2	Q5D862	2391 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-205	ENST00000586039	IGHV7-4-1	A0A0J9YVY3	117 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	PLA2G10	O15496	165 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	CYB5B	O43169	146 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	ATG12	O94817	140 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	SPP1	P10451	314 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	VAMP1	P23763	118 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	ERH	P84090	104 aa	Known RBP	11.1	□□□□□ -0.63
PKN1-205	ENST00000586039		Q56UQ5	140 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	C18orf15	Q96N68	181 aa		11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	MRPL36	Q9P0J6	103 aa	Known RBP	11.1	□□□□□ -0.63
PKN1-205	ENST00000586039	B3GALNT1	O75752	331 aa		11.09	□□□□□ -0.63
PKN1-205	ENST00000586039	RNASE2	P10153	161 aa	Known RBP	11.09	□□□□□ -0.63
PKN1-205	ENST00000586039	FAM90A2P	Q658T7	463 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms