RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
SS18-226ENST00000585241 ATP6V0CP27449 155 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 GNPNAT1Q96EK6 184 aaPredicted RBP12.5□□□□□ -0.41
SS18-226ENST00000585241 UBE2E2Q96LR5 201 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
SS18-226ENST00000585241 GGTLC1Q9BX51 225 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 S4R3C0 116 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 TCRBV4S1A1TA0A5B7 111 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 AGPAT2O15120 278 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 OR10J1P30954 320 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 RUNX1Q01196 453 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 SLC45A2Q9UMX9 530 aa12.49□□□□□ -0.41
SS18-226ENST00000585241 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 GNG7O60262 68 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 IGHV3-23P01764 117 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 CTSGP08311 255 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 SEC11BP0C7V7 166 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 SPP1P10451 314 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
SS18-226ENST00000585241 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
SS18-226ENST00000585241 CAMLGP49069 296 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 PRR20EP86478 221 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 PRR20CP86479 221 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 PRR20DP86480 221 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 PRR20BP86481 221 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 PRR20AP86496 221 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 FOXL1Q12952 345 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 RAB31Q13636 194 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 Q56UQ5 140 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 CYP2G1PQ6ZSU1 146 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 OR2G3Q8NGZ4 309 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
SS18-226ENST00000585241 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 TGOLN2O43493 480 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 CLEC3BP05452 202 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 LGALS1P09382 135 aaKnown RBP12.47□□□□□ -0.41
SS18-226ENST00000585241 ADMP35318 185 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
SS18-226ENST00000585241 SELENOTP62341 195 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 SPSB3Q6PJ21 355 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 ZNF414Q96IQ9 312 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 SH3BGRL3Q9H299 93 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 GNB4Q9HAV0 340 aa12.47□□□□□ -0.41
SS18-226ENST00000585241 SETD2Q9BYW2 2564 aaPredicted RBP12.47□□□□□ -0.41
SS18-226ENST00000585241 OR2T8A6NH00 312 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 CFDP00746 253 aaPredicted RBP12.46□□□□□ -0.41
SS18-226ENST00000585241 IGHV3-11P01762 117 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 GPR183P32249 361 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 SERF2P84101 59 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 KRTAP24-1Q3LI83 254 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 TIGITQ495A1 244 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.41
SS18-226ENST00000585241 ZNF709Q8N972 641 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 CHRDL1Q9BU40 450 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 SLC25A32Q9H2D1 315 aa12.46□□□□□ -0.41
SS18-226ENST00000585241 I3L521 148 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
SS18-226ENST00000585241 TOMM40O96008 361 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 FABP1P07148 127 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 LINC00869P0C866 280 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 CD28P10747 220 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 ZNF90Q03938 601 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 TEX261Q6UWH6 196 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 TMEM182Q6ZP80 229 aaPredicted RBP12.45□□□□□ -0.42
SS18-226ENST00000585241 STPG3Q8N7X2 389 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 RFNGQ9Y644 331 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 PXMP4Q9Y6I8 212 aa12.45□□□□□ -0.42
SS18-226ENST00000585241 HAX1O00165 279 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 TRBV12-3P01733 135 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 PLP1P60201 277 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 B2MP61769 119 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 IFITM2Q01629 132 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 TMED6Q8WW62 240 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 SLC39A9Q9NUM3 307 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 PLA2G2EQ9NZK7 142 aa12.44□□□□□ -0.42
SS18-226ENST00000585241 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
SS18-226ENST00000585241 BMPR1BO00238 502 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 YIF1AO95070 293 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 OR2C1O95371 312 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 TSPAN15O95858 294 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 PSG1P11464 419 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 ARL3P36405 182 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 KRTAP10-3P60369 221 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 AWAT1Q58HT5 328 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 ZNF600Q6ZNG1 722 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 ZNF680Q8NEM1 530 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 TSSC4Q9Y5U2 329 aaPredicted RBP12.43□□□□□ -0.42
SS18-226ENST00000585241 ATRQ13535 2644 aa12.43□□□□□ -0.42
SS18-226ENST00000585241 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms