RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 FNDC4Q9H6D8 234 aaPredicted RBP11.76□□□□□ -0.53
SKA2-209ENST00000583976 SRD5A3Q9H8P0 318 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 C2orf70A6NJV1 201 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 H3BP45 60 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 SSSCA1O60232 199 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 IFNA4P05014 189 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 CIB3Q96Q77 187 aaPredicted RBP11.75□□□□□ -0.53
SKA2-209ENST00000583976 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
SKA2-209ENST00000583976 F8W735 103 aaPredicted RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 TGOLN2O43493 480 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 SPANXN5Q5MJ07 72 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 OR2K2Q8NGT1 345 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 CHRDL1Q9BU40 450 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 PSENENQ9NZ42 101 aa11.74□□□□□ -0.53
SKA2-209ENST00000583976 MRPL36Q9P0J6 103 aaKnown RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 RCL1Q9Y2P8 373 aaKnown RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 LSM5Q9Y4Y9 91 aaKnown RBP11.74□□□□□ -0.53
SKA2-209ENST00000583976 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 C7orf66A4D0T2 115 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 GNG7O60262 68 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 FOLR2P14207 255 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 RAB11AP62491 216 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
SKA2-209ENST00000583976 TXN2Q99757 166 aa11.73□□□□□ -0.53
SKA2-209ENST00000583976 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 OR11H12B2RN74 326 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 NUPL2O15504 423 aaKnown RBP11.72□□□□□ -0.53
SKA2-209ENST00000583976 TMEM50AO95807 157 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 CTSGP08311 255 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 ADMP35318 185 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 NPBWR1P48145 328 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 S100A10P60903 97 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 FAM106AQ4KMX7 169 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 MGAT4CQ9UBM8 478 aa11.72□□□□□ -0.53
SKA2-209ENST00000583976 STRAPQ9Y3F4 350 aaKnown RBP11.72□□□□□ -0.53
SKA2-209ENST00000583976 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 K7EPK0 472 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 PAX9P55771 341 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
SKA2-209ENST00000583976 RAB32Q13637 225 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 OXA1LQ15070 435 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 SPSB3Q6PJ21 355 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 ACY3Q96HD9 319 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 SMIM8Q96KF7 97 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
SKA2-209ENST00000583976 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 L7N2F9 121 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 FCGR2BP31994 310 aaPredicted RBP11.7□□□□□ -0.54
SKA2-209ENST00000583976 RND2P52198 227 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 VAMP2P63027 116 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 IL15RAQ13261 267 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 PRSS54Q6PEW0 395 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 UNQ9165/PRO28630Q6UXU0 137 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 SLC16A13Q7RTY0 426 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 MLXQ9UH92 298 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
SKA2-209ENST00000583976 CLN5O75503 358 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 CCNKO75909 580 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 YIF1AO95070 293 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
SKA2-209ENST00000583976 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 SLC25A4P12235 298 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 BCAP31P51572 246 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 H2BFSP57053 126 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 OR8G2PQ6IF36 304 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 BTNL8Q6UX41 500 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 NPIPB3Q92617 1050 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 C20orf24Q9BUV8 137 aa11.69□□□□□ -0.54
SKA2-209ENST00000583976 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 LGALS9O00182 355 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 CBLN1P23435 193 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 GPX4P36969 197 aaPredicted RBP11.68□□□□□ -0.54
SKA2-209ENST00000583976 TAS2R30P59541 319 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
SKA2-209ENST00000583976 PMS2P11Q13670 270 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 GAMTQ14353 236 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 TIGITQ495A1 244 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 NMES1Q9C002 83 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 ZNF436Q9C0F3 470 aaPredicted RBP11.68□□□□□ -0.54
SKA2-209ENST00000583976 MED28Q9H204 178 aa11.68□□□□□ -0.54
SKA2-209ENST00000583976 A8MWP6 167 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 NDUFA4O00483 81 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
SKA2-209ENST00000583976 TSC22D2O75157 780 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms