RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CCDC140Q96MF4 163 aa9.02□□□□□ -0.97
CDRT1-207ENST00000583965 PEF1Q9UBV8 284 aaKnown RBP9.02□□□□□ -0.97
CDRT1-207ENST00000583965 TRAV30A0A087WSZ9 112 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 BORCS7-ASMTA0A0B4J1R7 106 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 IGHV3-21A0A0B4J1V1 117 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 ADARB2-AS1A8MUL3 147 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 DFFBO76075 338 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 ARL16Q0P5N6 197 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 GAMTQ14353 236 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 ZNF266Q14584 549 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 MLANAQ16655 118 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 Q56UQ5 140 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 LILRB2Q8N423 598 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 OR1S2Q8NGQ3 325 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 WFDC1Q9HC57 220 aa9.01□□□□□ -0.97
CDRT1-207ENST00000583965 OR2T8A6NH00 312 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 F8W735 103 aaPredicted RBP9□□□□□ -0.97
CDRT1-207ENST00000583965 GNG7O60262 68 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 CLN5O75503 358 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 IGHV3-48P01763 117 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 IGHV3-23P01764 117 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
CDRT1-207ENST00000583965 CLEC3BP05452 202 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 RND2P52198 227 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 VWC2Q2TAL6 325 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 NSUN5P1Q3KNT7 163 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 CLLU1Q5K131 121 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 RPL7L1Q6DKI1 246 aaKnown RBP9□□□□□ -0.97
CDRT1-207ENST00000583965 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
CDRT1-207ENST00000583965 CLEC19AQ6UXS0 136 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 TMEM217Q8N7C4 229 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 OR5C1Q8NGR4 320 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 NPIPB3Q92617 1050 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 OR5B12Q96R08 314 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 MDFIQ99750 246 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 ATP5SQ99766 215 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 GINS3Q9BRX5 216 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 TMEM147Q9BVK8 224 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 PARD6GQ9BYG4 376 aaPredicted RBP9□□□□□ -0.97
CDRT1-207ENST00000583965 SLC25A32Q9H2D1 315 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 NPVFQ9HCQ7 196 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 UQCC1Q9NVA1 299 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 S4R3C0 116 aa9□□□□□ -0.97
CDRT1-207ENST00000583965 VWFP04275 2813 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 A0A1W2PRX2 142 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 ANKRD34BA5PLL1 514 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 NUPL2O15504 423 aaKnown RBP8.99□□□□□ -0.97
CDRT1-207ENST00000583965 TGOLN2O43493 480 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 ZP3P21754 424 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 GPR183P32249 361 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 ARL3P36405 182 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 ZNF616Q08AN1 781 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 C18orf65Q6ZTR6 163 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 LRRC20Q8TCA0 184 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 ACY3Q96HD9 319 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 SMIM3Q9BZL3 60 aa8.99□□□□□ -0.97
CDRT1-207ENST00000583965 MRPL36Q9P0J6 103 aaKnown RBP8.99□□□□□ -0.97
CDRT1-207ENST00000583965 LINC01619G3V211 115 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 CCL24O00175 119 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 BMPR1BO00238 502 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 GGCTO75223 188 aaKnown RBP8.98□□□□□ -0.97
CDRT1-207ENST00000583965 FABP1P07148 127 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 CTSGP08311 255 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 SEC11BP0C7V7 166 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 OR10J1P30954 320 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 RELQ04864 619 aaPredicted RBP8.98□□□□□ -0.97
CDRT1-207ENST00000583965 TEPPQ6URK8 271 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 OR11H1Q8NG94 326 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 OR4F17Q8NGA8 305 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 OR1N2Q8NGR9 330 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 DPF1Q92782 380 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 OR4F4Q96R69 305 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 TRGV9Q99603 122 aa8.98□□□□□ -0.97
CDRT1-207ENST00000583965 IGHV4OR15-8A0A075B7B6 117 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 A0A087WW49 117 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 PPP5D1E7EU14 171 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 MPDU1O75352 247 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 IGKV1-17P01599 117 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 NMBP08949 121 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 IGLC1P0CG04 106 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 SPP1P10451 314 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 MYCNOSP40205 109 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 RAB14P61106 215 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 YPEL3P61236 119 aaPredicted RBP8.97□□□□□ -0.97
CDRT1-207ENST00000583965 RAB31Q13636 194 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 FHL3Q13643 280 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 CLINT1Q14677 625 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 RPEL1Q2QD12 228 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 DEFB136Q30KP8 78 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 HIST2H2BDQ6DRA6 164 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
CDRT1-207ENST00000583965 RAX2Q96IS3 184 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms