RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
SS18-222ENST00000582792 ERHP84090 104 aaKnown RBP10□□□□□ -0.81
SS18-222ENST00000582792 WT1-ASQ06250 92 aa10□□□□□ -0.81
SS18-222ENST00000582792 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
SS18-222ENST00000582792 LAMTOR1Q6IAA8 161 aa10□□□□□ -0.81
SS18-222ENST00000582792 MAP6D1Q9H9H5 199 aa10□□□□□ -0.81
SS18-222ENST00000582792 GPN1Q9HCN4 374 aaPredicted RBP10□□□□□ -0.81
SS18-222ENST00000582792 DAZ1Q9NQZ3 744 aaKnown RBP10□□□□□ -0.81
SS18-222ENST00000582792 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 SNRPGP15A8MWD9 76 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 OR13C7P0DN81 318 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 FCGR2BP31994 310 aaPredicted RBP9.99□□□□□ -0.81
SS18-222ENST00000582792 OR10W1Q8NGF6 305 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 OR1P1Q8NH06 330 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 VN1R17PQ8TDU5 208 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 HINT2Q9BX68 163 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
SS18-222ENST00000582792 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
SS18-222ENST00000582792 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 HOXB5P09067 269 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 PVRIGQ6DKI7 326 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 C12orf45Q8N5I9 185 aaPredicted RBP9.98□□□□□ -0.81
SS18-222ENST00000582792 GATAD1Q8WUU5 269 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 BSCL2Q96G97 398 aaPredicted RBP9.98□□□□□ -0.81
SS18-222ENST00000582792 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 MFFQ9GZY8 342 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 ENY2Q9NPA8 101 aa9.98□□□□□ -0.81
SS18-222ENST00000582792 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 NDUFA4O00483 81 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 MED6O75586 246 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 HOXA1P49639 335 aaPredicted RBP9.97□□□□□ -0.81
SS18-222ENST00000582792 SUB1P53999 127 aaKnown RBP eCLIP9.97□□□□□ -0.81
SS18-222ENST00000582792 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
SS18-222ENST00000582792 PRR20EP86478 221 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 PRR20CP86479 221 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 PRR20DP86480 221 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 PRR20BP86481 221 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 PRR20AP86496 221 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 APRG1Q8IVJ8 170 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 ATP6V0BQ99437 205 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 CSTL1Q9H114 145 aa9.97□□□□□ -0.81
SS18-222ENST00000582792 C11orf68Q9H3H3 251 aaKnown RBP9.97□□□□□ -0.81
SS18-222ENST00000582792 K7EMT4 169 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 ADAP1O75689 374 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 IFNA4P05014 189 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 HTR2BP41595 481 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 NANOS2P60321 138 aaKnown RBP9.96□□□□□ -0.82
SS18-222ENST00000582792 NOXA1Q86UR1 476 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 C11orf45Q8TAV5 145 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 RARRES2Q99969 163 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 C20orf24Q9BUV8 137 aa9.96□□□□□ -0.82
SS18-222ENST00000582792 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 CEBPZOSA8MTT3 80 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 MPTX1A8MV57 137 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 CORTO00230 105 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 SNCAP37840 140 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 TCTAP57738 103 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 ID3Q02535 119 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 C2CD4CQ8TF44 421 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 CIB3Q96Q77 187 aaPredicted RBP9.95□□□□□ -0.82
SS18-222ENST00000582792 CHRDL1Q9BU40 450 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 C21orf62Q9NYP8 219 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 U3KQ87 197 aa9.95□□□□□ -0.82
SS18-222ENST00000582792 IGHV3OR16-8A0A075B7F1 116 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 C7orf66A4D0T2 115 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 F8W735 103 aaPredicted RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 RNASE2P10153 161 aaKnown RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 ADMP35318 185 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 MFAP2P55001 183 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 CMC4P56277 68 aaPredicted RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 ZNF124Q15973 351 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 IAH1Q2TAA2 248 aaPredicted RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 C2orf83Q53S99 150 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 SPINK9Q5DT21 86 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 ZBTB8BQ8NAP8 495 aaPredicted RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 DTD1Q8TEA8 209 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 RBKSQ9H477 322 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 HEYLQ9NQ87 328 aaPredicted RBP9.94□□□□□ -0.82
SS18-222ENST00000582792 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
SS18-222ENST00000582792 NKX2-1P43699 371 aaPredicted RBP9.93□□□□□ -0.82
SS18-222ENST00000582792 OXA1LQ15070 435 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 OR11H2Q8NH07 326 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 C2orf50Q96LR7 162 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 RNF2Q99496 336 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 TXN2Q99757 166 aa9.93□□□□□ -0.82
SS18-222ENST00000582792 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 IGHV3-21A0A0B4J1V1 117 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 I3L2K1 104 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 K7EIM0 57 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 CHEK1O14757 476 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms