RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NPPCP23582 126 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 SSBP2P81877 361 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-204ENST00000582252 KIAA0141Q14154 515 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-204ENST00000582252 EBI3Q14213 229 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 C1QL4Q86Z23 238 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 OR4X1Q8NH49 305 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 TMEM37Q8WXS4 190 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 POLR3KQ9Y2Y1 108 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-204ENST00000582252 VWC2LB2RUY7 222 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 APELAP0DMC3 54 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 CTRB1P17538 263 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 FXYD3Q14802 87 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 CTRB2Q6GPI1 263 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 OR51G1Q8NGK1 321 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 Q8WTZ3 238 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 C11orf52Q96A22 123 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 VPS13CQ709C8 3753 aa18.02■□□□□ 0.48
CCDC47-204ENST00000582252 TGOLN2O43493 480 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 ZNF90Q03938 601 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 OR5B12Q96R08 314 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 MRPL36Q9P0J6 103 aaKnown RBP18.01■□□□□ 0.47
CCDC47-204ENST00000582252 URGCP-MRPS24S4R325 110 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 H7BYZ3 331 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 IGHV3-48P01763 117 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 S100PP25815 95 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 DEFB113Q30KQ7 82 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 LRRC75A-AS1Q8N1F1 130 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 TBX15Q96SF7 602 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 WNT10AQ9GZT5 417 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 C1RLQ9NZP8 487 aa18.01■□□□□ 0.47
CCDC47-204ENST00000582252 SCO2A0A1W2PP80 73 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 TMEM11P17152 192 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 BRS3P32247 399 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 ZNF343Q6P1L6 599 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 C16orf82Q7Z2V1 217 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 ZFP82Q8N141 532 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 Q8N6K4 173 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 ABCA2Q9BZC7 2435 aa18■□□□□ 0.47
CCDC47-204ENST00000582252 ITPR2Q14571 2701 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 A0A1W2PRE2 83 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 FAM106CPP0CH98 169 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 CD99P14209 185 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 RPS10P46783 165 aaKnown RBP17.99■□□□□ 0.47
CCDC47-204ENST00000582252 ZNF562Q6V9R5 426 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 STXBP6Q8NFX7 210 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 MBD6Q96DN6 1003 aa17.99■□□□□ 0.47
CCDC47-204ENST00000582252 PPP1R2P9O14990 202 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 S100A6P06703 90 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 FABP1P07148 127 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 CD24P25063 80 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 DYNAPQ8N1N2 210 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 OR5AU1Q8NGC0 362 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 ZNF503Q96F45 646 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 SLC25A2Q9BXI2 301 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 SAV1Q9H4B6 383 aaPredicted RBP17.98■□□□□ 0.47
CCDC47-204ENST00000582252 ZNF355PQ9NSJ1 428 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 NAV3Q8IVL0 2385 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 IGHV4-30-2A0A087WSY4 118 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 NCBP2LA6PVI3 153 aaKnown RBP17.98■□□□□ 0.47
CCDC47-204ENST00000582252 UBE2L3P68036 154 aaKnown RBP17.98■□□□□ 0.47
CCDC47-204ENST00000582252 CLEC12BQ2HXU8 276 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 LINC01551Q86U37 167 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 C2CD4CQ8TF44 421 aa17.98■□□□□ 0.47
CCDC47-204ENST00000582252 TRBV24-1A0A075B6N3 115 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 I3L2K1 104 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 CXCL1P09341 107 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 SLC25A16P16260 332 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 C19orf35Q6ZS72 473 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 ARPC1AQ92747 370 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 FAM167A-AS1Q96KT0 104 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 PAXXQ9BUH6 204 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 LY96Q9Y6Y9 160 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 PLXNB1O43157 2135 aa17.97■□□□□ 0.47
CCDC47-204ENST00000582252 CREBBPQ92793 2442 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 TGIF2-C20orf24A0A0A6YYL0 155 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 C9JCJ5 164 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 PLP1P60201 277 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 PATE2Q6UY27 113 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 FAM210BQ96KR6 192 aa17.96■□□□□ 0.47
CCDC47-204ENST00000582252 IGHV4-61A0A0C4DH41 118 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 NPIPB5A8MRT5 1133 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 HYPMO75409 117 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 GALR1P47211 349 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 LINC00305Q7Z4B0 112 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 OR1B1Q8NGR6 318 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 DERL1Q9BUN8 251 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 OR51M1Q9H341 326 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 DMRT1Q9Y5R6 373 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.95■□□□□ 0.466e-7■■■□□ 17.9
CCDC47-204ENST00000582252 CCDC168Q8NDH2 2452 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 MDFIC2A0A1B0GVS7 189 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 OR10J4P0C629 311 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 RASL11BQ9BPW5 248 aa17.95■□□□□ 0.46
CCDC47-204ENST00000582252 IGHV3-21A0A0B4J1V1 117 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 NPFFO15130 113 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 ORM2P19652 201 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 SAA4P35542 130 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 SRP14P37108 136 aaKnown RBP17.94■□□□□ 0.46
CCDC47-204ENST00000582252 CX3CL1P78423 397 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 KCNIP4Q6PIL6 250 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms