RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 LYL1P12980 280 aa12.38□□□□□ -0.43
SREBF1-219ENST00000580540 OR1S2Q8NGQ3 325 aa12.38□□□□□ -0.43
SREBF1-219ENST00000580540 METTL26Q96S19 204 aa12.38□□□□□ -0.43
SREBF1-219ENST00000580540 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-219ENST00000580540 PAIP2BQ9ULR5 123 aaKnown RBP12.38□□□□□ -0.43
SREBF1-219ENST00000580540 FLVCR2Q9UPI3 526 aa12.38□□□□□ -0.43
SREBF1-219ENST00000580540 DNASE2O00115 360 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-219ENST00000580540 DFFBO76075 338 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 IGKV1-17P01599 117 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 IAPPP10997 89 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 OR10J1P30954 320 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 ODF3L2Q3SX64 289 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 LILRB2Q8N423 598 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 LRTM2Q8N967 370 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 Q8WTZ3 238 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 TMEM231Q9H6L2 316 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
SREBF1-219ENST00000580540 A0A1W2PS18 150 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 NDUFB6O95139 128 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 IL7P13232 177 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
SREBF1-219ENST00000580540 FAM90A2PQ658T7 463 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 NARS2Q96I59 477 aaKnown RBP12.36□□□□□ -0.43
SREBF1-219ENST00000580540 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 TMED3Q9Y3Q3 217 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 DNAH7Q8WXX0 4024 aa12.36□□□□□ -0.43
SREBF1-219ENST00000580540 PITX3O75364 302 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 MED6O75586 246 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 CD5P06127 495 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 UBE2MP61081 183 aaKnown RBP12.35□□□□□ -0.43
SREBF1-219ENST00000580540 GGNBP1Q5YKI7 109 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
SREBF1-219ENST00000580540 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 SLC25A6P12236 298 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
SREBF1-219ENST00000580540 APOC4P55056 127 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 CMC4P56277 68 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-219ENST00000580540 ZNF124Q15973 351 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 C4orf46Q504U0 113 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 C7orf50Q9BRJ6 194 aaKnown RBP12.34□□□□□ -0.43
SREBF1-219ENST00000580540 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
SREBF1-219ENST00000580540 FAM90A26D6RGX4 464 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 WRBO00258 174 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 ADAP1O75689 374 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 OR4E1P0C645 316 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 RD3LP0DJH9 198 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 CRYBB3P26998 211 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 P2RY1P47900 373 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
SREBF1-219ENST00000580540 YPEL3P61236 119 aaPredicted RBP12.33□□□□□ -0.44
SREBF1-219ENST00000580540 RAB11AP62491 216 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 STXBP6Q8NFX7 210 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 GRAMD2BQ96HH9 432 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 SLC35E1Q96K37 410 aa12.33□□□□□ -0.44
SREBF1-219ENST00000580540 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
SREBF1-219ENST00000580540 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 SYNGR2O43760 224 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 IL4P05112 153 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 HNRNPCP07910 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
SREBF1-219ENST00000580540 BTCP35070 178 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 GPX4P36969 197 aaPredicted RBP12.32□□□□□ -0.44
SREBF1-219ENST00000580540 DHRS2Q13268 280 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 LYG2Q86SG7 212 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 STPG3Q8N7X2 389 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
SREBF1-219ENST00000580540 TOMM40O96008 361 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 IFNA21P01568 189 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 DEFB131AP59861 70 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
SREBF1-219ENST00000580540 GAMTQ14353 236 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 CIB3Q96Q77 187 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-219ENST00000580540 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
SREBF1-219ENST00000580540 PLA2G10O15496 165 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 LYRM1O43325 122 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 PSG1P11464 419 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-219ENST00000580540 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 LEMD1Q68G75 181 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 OR51G1Q8NGK1 321 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
SREBF1-219ENST00000580540 MPTX1A8MV57 137 aa12.29□□□□□ -0.44
SREBF1-219ENST00000580540 H3BP45 60 aa12.29□□□□□ -0.44
SREBF1-219ENST00000580540 UBE2CO00762 179 aa12.29□□□□□ -0.44
SREBF1-219ENST00000580540 SPRY2O43597 315 aa12.29□□□□□ -0.44
SREBF1-219ENST00000580540 EIF2B2P49770 351 aaKnown RBP12.29□□□□□ -0.44
SREBF1-219ENST00000580540 U3KQE9 123 aa12.29□□□□□ -0.44
SREBF1-219ENST00000580540 TRAV2A0A0B4J234 112 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms