RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
ITGB4-206ENST00000579662 H0YJW9 148 aa12.51□□□□□ -0.41
ITGB4-206ENST00000579662 H7C2G1 150 aa12.51□□□□□ -0.41
ITGB4-206ENST00000579662 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
ITGB4-206ENST00000579662 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
ITGB4-206ENST00000579662 H3BRM9 83 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 K7ENP7 123 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 TRGV9Q99603 122 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 IGFL3Q6UXB1 125 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 TCF23Q7RTU1 214 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 A0A1B0GW64 132 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 CD5P06127 495 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 IGKV1D-17A0A075B6S4 117 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 STAG3L3P0CL85 134 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 COQ2Q96H96 371 aa12.5□□□□□ -0.41
ITGB4-206ENST00000579662 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 LILRA1O75019 489 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM170AQ8WVE7 144 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 RNASE7Q9H1E1 156 aaKnown RBP12.49□□□□□ -0.41
ITGB4-206ENST00000579662 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 SOD3P08294 240 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 SLC25A16P16260 332 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 BUB1B-PAK6H3BSN5 160 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 ITGB1BP1O14713 200 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 PLAURQ03405 335 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 F11RQ9Y624 299 aaKnown RBP12.49□□□□□ -0.41
ITGB4-206ENST00000579662 FAM186AA6NE01 2351 aa12.49□□□□□ -0.41
ITGB4-206ENST00000579662 PPBPP02775 128 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 CD7P09564 240 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 ARHGEF17Q96PE2 2063 aaPredicted RBP12.48□□□□□ -0.41
ITGB4-206ENST00000579662 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 C5orf64Q2M2E5 130 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
ITGB4-206ENST00000579662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
ITGB4-206ENST00000579662 TCF21O43680 179 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 ATP5L2Q7Z4Y8 100 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
ITGB4-206ENST00000579662 TRBV7-1A0A0A6YYK4 115 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 F2Z2F3 143 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 SRSF8Q9BRL6 282 aaKnown RBP12.47□□□□□ -0.41
ITGB4-206ENST00000579662 PSMB11A5LHX3 300 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 SRSF4Q08170 494 aaKnown RBP12.47□□□□□ -0.41
ITGB4-206ENST00000579662 KLRD1Q13241 179 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 C15orf32Q32M92 178 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 FOXC2Q99958 501 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 VSIRQ9H7M9 311 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM242Q9NWH2 141 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 NDUFS8O00217 210 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
ITGB4-206ENST00000579662 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 TSKUQ8WUA8 353 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 PARD6GQ9BYG4 376 aaPredicted RBP12.46□□□□□ -0.41
ITGB4-206ENST00000579662 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 TMEM50AO95807 157 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 GNB1LQ9BYB4 327 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 RP1P56715 2156 aa12.46□□□□□ -0.41
ITGB4-206ENST00000579662 HOXA5P20719 270 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 SRSF3P84103 164 aaKnown RBP12.46□□□□□ -0.42
ITGB4-206ENST00000579662 HGFACQ04756 655 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 TEX38Q6PEX7 206 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 OCC1Q8TAD7 63 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 FNDC10F2Z333 226 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 SMIM13P0DJ93 91 aa12.46□□□□□ -0.42
ITGB4-206ENST00000579662 MGST2Q99735 147 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 Q8TCH9 128 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 SLC25A39Q9BZJ4 359 aaPredicted RBP12.45□□□□□ -0.42
ITGB4-206ENST00000579662 PLXNA4Q9HCM2 1894 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 PSG1P11464 419 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 TTC9CQ8N5M4 171 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 NXT2Q9NPJ8 142 aaKnown RBP12.45□□□□□ -0.42
ITGB4-206ENST00000579662 DNAJC13O75165 2243 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 LINC00473A8K010 186 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 USMG5Q96IX5 58 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 APC2O95996 2303 aa12.45□□□□□ -0.42
ITGB4-206ENST00000579662 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 RNF144BQ7Z419 303 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 E7EQL1 145 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms