RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ASCL4Q6XD76 172 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 MAPK1IP1LQ8NDC0 245 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 KLHDC3Q9BQ90 382 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 DAZ1Q9NQZ3 744 aaKnown RBP8.36□□□□□ -1.07
MSI2-209ENST00000579483 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 KIF26BQ2KJY2 2108 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 DANCRP0C864 163 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 LMO1P25800 156 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 OR5AN1Q8NGI8 311 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 PRADC1Q9BSG0 188 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 M0R381 172 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 VENTXO95231 258 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 CRPP02741 224 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 CD7P09564 240 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 NR2C2APQ86WQ0 139 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 COQ2Q96H96 371 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 TRBV9A0A0B4J1U6 114 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 ZNF880Q6PDB4 577 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 FAM110DQ8TAY7 271 aaPredicted RBP8.35□□□□□ -1.07
MSI2-209ENST00000579483 VN1R17PQ8TDU5 208 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 C18orf12Q96KH6 178 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 PRDM13Q9H4Q3 707 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
MSI2-209ENST00000579483 LINC00311Q8N616 119 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 TRGV9Q99603 122 aa8.35□□□□□ -1.07
MSI2-209ENST00000579483 POLEQ07864 2286 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 TRBV20OR9-2A0A075B6H5 130 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 CD81P60033 236 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 ZNF329Q86UD4 541 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 ANAPC1Q9H1A4 1944 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 CREBBPQ92793 2442 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 K7EM74 188 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 RAMP3O60896 148 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 CACNG7P62955 275 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 RUSC1-AS1Q66K80 236 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 IGHV2-5P01817 119 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 WDR81Q562E7 1941 aa8.34□□□□□ -1.07
MSI2-209ENST00000579483 PKDREJQ9NTG1 2253 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 PTPRQQ9UMZ3 2332 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 SHISA9B4DS77 424 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 INSP01308 110 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 HINT1P49773 126 aaPredicted RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 APOC4P55056 127 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 TMEM249Q2WGJ8 235 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 AURKAIP1Q9NWT8 199 aaPredicted RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 ACACBO00763 2458 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 M0R143 59 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 CENPWQ5EE01 88 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 TMEM158Q8WZ71 300 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 A0A1W2PRE2 83 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 SUMO2P61956 95 aaKnown RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 ID3Q02535 119 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 REC114Q7Z4M0 266 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 GBF1Q92538 1859 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 NOTCH4Q99466 2003 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 H3BRM9 83 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 SOD3P08294 240 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 ZNF502Q8TBZ5 544 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 VPREB3Q9UKI3 123 aa8.33□□□□□ -1.08
MSI2-209ENST00000579483 SNRNP200O75643 2136 aaKnown RBP8.33□□□□□ -1.08
MSI2-209ENST00000579483 CGAP01215 116 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 PSMB2P49721 201 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 HBBP68871 147 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 LRRC75A-AS1Q8N1F1 130 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 FER1L6-AS1Q8NA97 138 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 H3BUA1 57 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 LOXP28300 417 aaPredicted RBP8.32□□□□□ -1.08
MSI2-209ENST00000579483 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 TFF3Q07654 80 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 LINC00477Q96M19 166 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 NRN1Q9NPD7 142 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 FREM3P0C091 2139 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 RNF224P0DH78 156 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 NIT2Q9NQR4 276 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 WDR83OSQ9Y284 106 aa8.32□□□□□ -1.08
MSI2-209ENST00000579483 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 CXCL2P19875 107 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 H2BFSP57053 126 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 A0A0A6YYD4 124 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 MIR17HGQ75NE6 70 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
MSI2-209ENST00000579483 ZNF407Q9C0G0 2248 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms