RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 BSXQ3C1V8 233 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CLN5O75503 358 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 UPK1BO75841 260 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 NDUFB6O95139 128 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CDS2O95674 445 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 AARDQ4LEZ3 155 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 Q6ZRM9 215 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 FAM24BQ8N5W8 94 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 OR4X1Q8NH49 305 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 GLYATL2Q8WU03 294 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RARRES2Q99969 163 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMEM222Q9H0R3 208 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 C11orf68Q9H3H3 251 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 ENY2Q9NPA8 101 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 KCNIP3Q9Y2W7 256 aa12.19□□□□□ -0.46
CDK5RAP3-206ENST00000578018 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 LYRM1O43325 122 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 OPRK1P41145 380 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CCR6P51684 374 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 DEFB131AP59861 70 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
CDK5RAP3-206ENST00000578018 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 OR5AC1P0C628 307 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 NPPCP23582 126 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RPL11P62913 178 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 ASAH1Q13510 395 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 MLANAQ16655 118 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 FAM219AQ8IW50 185 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 LHFPL5Q8TAF8 219 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 IL22RA2Q969J5 263 aa12.17□□□□□ -0.46
CDK5RAP3-206ENST00000578018 AKR1C4P17516 323 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CRYBB3P26998 211 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 SPCS3P61009 180 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMEM187Q14656 261 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 SELENOHQ8IZQ5 122 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 METTL26Q96S19 204 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RABAC1Q9UI14 185 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TBC1D24Q9ULP9 559 aa12.16□□□□□ -0.46
CDK5RAP3-206ENST00000578018 PIGBOS1A0A0B4J2F0 54 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 A0A1W2PS18 150 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 K7EQG2 157 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 SCGB2A1O75556 95 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 ANXA3P12429 323 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 P2RY1P47900 373 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 IFITM3Q01628 133 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TIGITQ495A1 244 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 C11orf45Q8TAV5 145 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 MFFQ9GZY8 342 aa12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-206ENST00000578018 HTR2BP41595 481 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SRPXP78539 464 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 MZT2BQ6NZ67 158 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 STXBP6Q8NFX7 210 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DNAH6Q9C0G6 4158 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SFT2D2O95562 160 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TCRBP04435 133 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 IGLC1P0CG04 106 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 STHQ8IWL8 128 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 LGI3Q8N145 548 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 RPP25LQ8N5L8 163 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DCANP1Q8TF63 244 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 GPR146Q96CH1 333 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 FBXL17Q9UF56 701 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 FLVCR2Q9UPI3 526 aa12.13□□□□□ -0.47
CDK5RAP3-206ENST00000578018 VPS13DQ5THJ4 4388 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 A0A0B4J2A0 478 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DEFB4AO15263 64 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 RND2P52198 227 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 PPP1R1AQ13522 171 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TMEM268Q5VZI3 342 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms