RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FAM57AQ8TBR7 257 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 TMEM167BQ9NRX6 74 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 FKBP11Q9NYL4 201 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 ELOVL5Q9NYP7 299 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 WNK2Q9Y3S1 2297 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 TET2Q6N021 2002 aaPredicted RBP4.34□□□□□ -1.72
VAPA-203ENST00000577539 PRSS46E5RG02 174 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 COX7A2P2O60397 106 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CEACAM4O75871 244 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 LINC00869P0C866 280 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CRISP2P16562 243 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 TMPRSS3P57727 454 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 DIAPH2-AS1Q14236 149 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 KIAA1644Q3SXP7 199 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 LRRC10Q5BKY1 277 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 MRPL54Q6P161 138 aaKnown RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 SLC25A48Q6ZT89 311 aaKnown RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CMTM2Q8TAZ6 248 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 C14orf144Q96I85 54 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 RNASE7Q9H1E1 156 aaKnown RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 NAT8BQ9UHF3 227 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CACNA1BQ00975 2339 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 A0A1B0GV90 55 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CD99P14209 185 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 AREGP15514 252 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CDKN1BP46527 198 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 DLX1P56177 255 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 RPL19P84098 196 aaKnown RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 IQCJQ1A5X6 159 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 RPEL1Q2QD12 228 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 ASPHD1Q5U4P2 390 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 HCP5Q6MZN7 132 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 FAM103A1Q9BTL3 118 aaKnown RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 SCNM1Q9BWG6 230 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 LINC00312Q9Y6C7 94 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 DYSFO75923 2080 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 IGKV1OR2-108A0A075B7D4 117 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 ITGB1BP1O14713 200 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 TYMSP04818 313 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 ORM2P19652 201 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 CCKARP32238 428 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 FOXL1Q12952 345 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 TGIF2LXQ8IUE1 241 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 ZNF664Q8N3J9 261 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 ZNF439Q8NDP4 499 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 OR5AU1Q8NGC0 362 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 OR5B3Q8NH48 314 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 SSBP3Q9BWW4 388 aaPredicted RBP4.33□□□□□ -1.72
VAPA-203ENST00000577539 IL36BQ9NZH7 164 aa4.33□□□□□ -1.72
VAPA-203ENST00000577539 K7EN84 100 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 NUPR1O60356 82 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 GCGP01275 180 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 CRYGCP07315 174 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 FRMD6-AS1P0C7T7 363 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 C8orf88P0DMB2 117 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 PYYP10082 97 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 RNASE2P10153 161 aaKnown RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 CEACAM8P31997 349 aaPredicted RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 IGFL3Q6UXB1 125 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 TOMM20LQ6UXN7 152 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 BEND2Q8NDZ0 799 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 BLNKQ8WV28 456 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 NEUROG1Q92886 237 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 CA1P00915 261 aaPredicted RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 COX7A1P24310 79 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 SCGB2A2Q13296 93 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 TMEM249Q2WGJ8 235 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 GBGT1Q8N5D6 347 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 OR5R1Q8NH85 324 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 OSR1Q8TAX0 266 aaPredicted RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 DNAJC4Q9NNZ3 241 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 TMEM106BQ9NUM4 274 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 ZNF257Q9Y2Q1 563 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 E7EUB6 86 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 LYNX1G3V0Z9 82 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 H0YJW9 148 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 H3BTX0 84 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 CIDEAO60543 219 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 MOSP00540 346 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 LYNX1P0DP58 116 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 SUB1P53999 127 aaKnown RBP eCLIP4.32□□□□□ -1.72
VAPA-203ENST00000577539 RANP62826 216 aaKnown RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 COTL1Q14019 142 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 VMA21Q3ZAQ7 101 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 COA6Q5JTJ3 125 aaKnown RBP4.32□□□□□ -1.72
VAPA-203ENST00000577539 OR4C13Q8NGP0 309 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 TBX15Q96SF7 602 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 HSPB9Q9BQS6 159 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
VAPA-203ENST00000577539 PTPRQQ9UMZ3 2332 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms