RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 CT45A6P0DMU7 189 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 CT45A5P0DMU8 189 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 CT45A7P0DMV0 189 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 MYOD1P15172 320 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 USF1P22415 310 aaPredicted RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 GCSHP23434 173 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 BRS3P32247 399 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 NUTF2P61970 127 aaKnown RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 UBE2L3P68036 154 aaKnown RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 MEF2CQ06413 473 aaPredicted RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 SRSF6Q13247 344 aaKnown RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 OR5I1Q13606 314 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 PRSS8Q16651 343 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 SPRNQ5BIV9 151 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 OR10J3Q5JRS4 329 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 FAM201AQ5SY85 155 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 IBA57Q5T440 356 aaKnown RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 TEX36Q5VZQ5 186 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 ZNF474Q6S9Z5 364 aaPredicted RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 PIP4P1Q86T03 277 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 OR4A5Q8NH83 315 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 VSTM2AQ8TAG5 236 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 CACNG8Q8WXS5 425 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 HARBI1Q96MB7 349 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 ZNF714Q96N38 554 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 HSPB9Q9BQS6 159 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 VAMP8Q9BV40 100 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 ZNF430Q9H8G1 570 aaPredicted RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 LINC00574Q9H8X3 128 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 ASCL3Q9NQ33 180 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 ZNF331Q9NQX6 463 aaPredicted RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 PEMTQ9UBM1 199 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 RANBP2P49792 3224 aaKnown RBP4.6□□□□□ -1.67
CTNS-210ENST00000576979 CADP27708 2225 aa4.6□□□□□ -1.67
CTNS-210ENST00000576979 SPAARA0A1B0GVQ0 90 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 IZUMO1RA6ND01 250 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 NUPR1O60356 82 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 CEACAM4O75871 244 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 PPOXP50336 477 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 RPL8P62917 257 aaKnown RBP4.59□□□□□ -1.67
CTNS-210ENST00000576979 CX3CL1P78423 397 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 VMA21Q3ZAQ7 101 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 C10orf113Q5VZT2 155 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 ETFRF1Q6IPR1 90 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 FAM71F2Q6NXP2 309 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 TEX43Q6ZNM6 134 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 ZNF833PQ6ZTB9 187 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 PDPNQ86YL7 162 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 DOLPP1Q86YN1 238 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 TGIF2LXQ8IUE1 241 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 FAM216BQ8N7L0 139 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 RBMXL3Q8N7X1 1067 aaKnown RBP4.59□□□□□ -1.67
CTNS-210ENST00000576979 NUP37Q8NFH4 326 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 OR4B1Q8NGF8 309 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 TMEM167AQ8TBQ9 72 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 C22orf15Q8WYQ4 148 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 H1FXQ92522 213 aaKnown RBP4.59□□□□□ -1.67
CTNS-210ENST00000576979 FLYWCH2Q96CP2 140 aaKnown RBP4.59□□□□□ -1.67
CTNS-210ENST00000576979 FAM122AQ96E09 287 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 KCNS1Q96KK3 526 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 PAXXQ9BUH6 204 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 MRPL20Q9BYC9 149 aaKnown RBP4.59□□□□□ -1.67
CTNS-210ENST00000576979 ICE1Q9Y2F5 2266 aa4.59□□□□□ -1.67
CTNS-210ENST00000576979 SZT2Q5T011 3432 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 PPIAL4EA0A075B759 164 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 A0A1W2PRX2 142 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 SMIM27A0A1W2PRY6 76 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 TCRBV4S1A1TA0A5B7 111 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 NPIPB5A8MRT5 1133 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 PPIAL4DF5H284 164 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 INS-IGF2F8WCM5 200 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 H0YJW9 148 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 NDUFB3O43676 98 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 SPINK4O60575 86 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 ZNF253O75346 499 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 APCSP02743 223 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 PPIAL4FP0DN26 164 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 WT1P19544 449 aaPredicted RBP4.58□□□□□ -1.68
CTNS-210ENST00000576979 RAB4AP20338 218 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 PMCHP20382 165 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 GATA2P23769 480 aaPredicted RBP4.58□□□□□ -1.68
CTNS-210ENST00000576979 CHRNB4P30926 498 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 AMTP48728 403 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 TDGF1P3P51864 188 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 TCL1AP56279 114 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 KRTDAPP60985 99 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 UBE2G1P62253 170 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 FXYD3Q14802 87 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 LRRC10Q5BKY1 277 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 FAM162BQ5T6X4 162 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 MRPL54Q6P161 138 aaKnown RBP4.58□□□□□ -1.68
CTNS-210ENST00000576979 DUX4L9Q6RFH8 374 aaPredicted RBP4.58□□□□□ -1.68
CTNS-210ENST00000576979 IGFL3Q6UXB1 125 aa4.58□□□□□ -1.68
CTNS-210ENST00000576979 TMEM136Q6ZRR5 245 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms