RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 VN1R17PQ8TDU5 208 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 MARC2Q969Z3 335 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 MOB3AQ96BX8 217 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 DGCR14Q96DF8 476 aaKnown RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 S100A16Q96FQ6 103 aaKnown RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 SRSF8Q9BRL6 282 aaKnown RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 PARD6GQ9BYG4 376 aaPredicted RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 YTHDF1Q9BYJ9 559 aaKnown RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 Q9H521 79 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 C5orf66Q9H5L9 145 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 COMMD9Q9P000 198 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 THYN1Q9P016 225 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 ANAPC10Q9UM13 185 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 PUS1Q9Y606 427 aaKnown RBP eCLIP4.59□□□□□ -1.67
NUP88-212ENST00000576708 F11RQ9Y624 299 aaKnown RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 HELTA6NFD8 242 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 ZNF701M0R085 212 aaPredicted RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 GPR31O00270 319 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 NDUFA4O00483 81 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 GATCO43716 136 aaKnown RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 SNAPC5O75971 98 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 IGKV1-39P01597 117 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 IGKV1D-39P04432 117 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 EIF4EP06730 217 aaKnown RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 CTSGP08311 255 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 HRH1P35367 487 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 TNFRSF9Q07011 255 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 NDUFA5Q16718 116 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 IZUMO4Q1ZYL8 232 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 SPINK9Q5DT21 86 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 UBE2NLQ5JXB2 153 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 TMEM69Q5SWH9 247 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 SLC38A6Q8IZM9 456 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 GBGT1Q8N5D6 347 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 OR5H2Q8NGV7 314 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 LSM10Q969L4 123 aaKnown RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 YIPF6Q96EC8 236 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 BSCL2Q96G97 398 aaPredicted RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 RNF2Q99496 336 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 SPAG8Q99932 426 aaPredicted RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 DAZ1Q9NQZ3 744 aaKnown RBP4.58□□□□□ -1.68
NUP88-212ENST00000576708 C21orf62Q9NYP8 219 aa4.58□□□□□ -1.68
NUP88-212ENST00000576708 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 I3L2K1 104 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 CHEK1O14757 476 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 YIF1AO95070 293 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 APOHP02749 345 aaPredicted RBP4.57□□□□□ -1.68
NUP88-212ENST00000576708 UCP1P25874 307 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 PRSS3P35030 304 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 APOC4P55056 127 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 LAMTOR1Q6IAA8 161 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 CEMP1Q6PRD7 247 aaPredicted RBP4.57□□□□□ -1.68
NUP88-212ENST00000576708 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 SNX29P2Q8IUI4 249 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 RPP25LQ8N5L8 163 aaKnown RBP4.57□□□□□ -1.68
NUP88-212ENST00000576708 TSPAN14Q8NG11 270 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 OR6F1Q8NGZ6 308 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 SLC25A46Q96AG3 418 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 RNF183Q96D59 192 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 RHPN1-AS1Q9BWJ2 59 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 MAP6D1Q9H9H5 199 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 COMMD3Q9UBI1 195 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 SMPXQ9UHP9 88 aa4.57□□□□□ -1.68
NUP88-212ENST00000576708 IGHV7-4-1A0A0J9YVY3 117 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 OR4C46A6NHA9 309 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 K7EMT4 169 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 K7EQM0 130 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 DEFB4AO15263 64 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 NUPL2O15504 423 aaKnown RBP4.56□□□□□ -1.68
NUP88-212ENST00000576708 CYB5BO43169 146 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 DEDDO75618 318 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 MT-CO2P00403 227 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 FGF2P09038 288 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 STAG3L2P0CL84 134 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 MFAP4P55083 255 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 TAS2R46P59540 309 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 NCS1P62166 190 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 KLF9Q13886 244 aaPredicted RBP4.56□□□□□ -1.68
NUP88-212ENST00000576708 TMEM88Q6PEY1 159 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 SPSB3Q6PJ21 355 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 H2BFWTQ7Z2G1 175 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 HSD17B13Q7Z5P4 300 aaPredicted RBP4.56□□□□□ -1.68
NUP88-212ENST00000576708 CMTM1Q8IZ96 169 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 FAM24BQ8N5W8 94 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 TMEM116Q8NCL8 245 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 OR1P1Q8NH06 330 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 GPX8Q8TED1 209 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 BORCS5Q969J3 196 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 MRGPRFQ96AM1 343 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 PINX1Q96BK5 328 aaKnown RBP4.56□□□□□ -1.68
NUP88-212ENST00000576708 SAT2Q96F10 170 aaPredicted RBP4.56□□□□□ -1.68
NUP88-212ENST00000576708 GALNT14Q96FL9 552 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 SEC22AQ96IW7 307 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 TMEM56Q96MV1 263 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 TMEM14BQ9NUH8 114 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 PRNDQ9UKY0 176 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms