RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 ATP6V0CP27449 155 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 RUNX1Q01196 453 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 THAP8Q8NA92 274 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 TRGV9Q99603 122 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 GINS3Q9BRX5 216 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 ANKRD34BA5PLL1 514 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 AGPAT2O15120 278 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
ERCC4-208ENST00000576348 ARL3P36405 182 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 TIGITQ495A1 244 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 CYP2G1PQ6ZSU1 146 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 ZNF491Q8N8L2 437 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 RNF152Q8N8N0 203 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 OR2G3Q8NGZ4 309 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 MGST2Q99735 147 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 RSG1Q9BU20 258 aa12.8□□□□□ -0.36
ERCC4-208ENST00000576348 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
ERCC4-208ENST00000576348 IGLC1P0CG04 106 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 CD28P10747 220 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 PROK1P58294 105 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 SELENOTP62341 195 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 SPSB3Q6PJ21 355 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 BPIFCQ8NFQ6 507 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 ARV1Q9H2C2 271 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 SLC25A32Q9H2D1 315 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 PEF1Q9UBV8 284 aaKnown RBP12.79□□□□□ -0.36
ERCC4-208ENST00000576348 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
ERCC4-208ENST00000576348 TIMM9Q9Y5J7 89 aa12.79□□□□□ -0.36
ERCC4-208ENST00000576348 TGOLN2O43493 480 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 TSPAN15O95858 294 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
ERCC4-208ENST00000576348 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 ELLP55199 621 aaPredicted RBP12.78□□□□□ -0.36
ERCC4-208ENST00000576348 RELQ04864 619 aaPredicted RBP12.78□□□□□ -0.36
ERCC4-208ENST00000576348 ZNF616Q08AN1 781 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 FFAR4Q5NUL3 377 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 Q8WTZ3 238 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 TMED6Q8WW62 240 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
ERCC4-208ENST00000576348 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 PXMP4Q9Y6I8 212 aa12.78□□□□□ -0.36
ERCC4-208ENST00000576348 JMJD1CQ15652 2540 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 PPP5D1E7EU14 171 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 IFNA7P01567 189 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 CDX1P47902 265 aaPredicted RBP12.77□□□□□ -0.37
ERCC4-208ENST00000576348 YPEL3P61236 119 aaPredicted RBP12.77□□□□□ -0.37
ERCC4-208ENST00000576348 ZNF90Q03938 601 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 AKR1C8PQ5T2L2 129 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 MIC13Q5XKP0 118 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 Q6ZRG5 221 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 STPG3Q8N7X2 389 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 MYOZ3Q8TDC0 251 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
ERCC4-208ENST00000576348 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.37
ERCC4-208ENST00000576348 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 YIF1AO95070 293 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 TOMM40O96008 361 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 IGKV1-17P01599 117 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 CTSGP08311 255 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 LINC00869P0C866 280 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 SPP1P10451 314 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 RPL29P47914 159 aaKnown RBP12.76□□□□□ -0.37
ERCC4-208ENST00000576348 B2MP61769 119 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 KIAA0141Q14154 515 aaPredicted RBP12.76□□□□□ -0.37
ERCC4-208ENST00000576348 TCTEX1D4Q5JR98 221 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 ALKAL2Q6UX46 152 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 ZNF600Q6ZNG1 722 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 TMEM182Q6ZP80 229 aaPredicted RBP12.76□□□□□ -0.37
ERCC4-208ENST00000576348 WIPF2Q8TF74 440 aaPredicted RBP12.76□□□□□ -0.37
ERCC4-208ENST00000576348 C4orf3Q8WVX3 66 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 PHYHIPLQ96FC7 376 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 CHRDL1Q9BU40 450 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 SLC39A9Q9NUM3 307 aa12.76□□□□□ -0.37
ERCC4-208ENST00000576348 NIPBLQ6KC79 2804 aaeCLIP12.76□□□□□ -0.37
ERCC4-208ENST00000576348 F8W735 103 aaPredicted RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 GGCTO75223 188 aaKnown RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 MBP02144 154 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 GATA2P23769 480 aaPredicted RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 LYZP61626 148 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 SERF2P84101 59 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 ACOT6Q3I5F7 207 aaPredicted RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 PRIMA1Q86XR5 153 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 OR51G1Q8NGK1 321 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 DPF1Q92782 380 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 CITED2Q99967 270 aaPredicted RBP12.75□□□□□ -0.37
ERCC4-208ENST00000576348 PBDC1Q9BVG4 233 aa12.75□□□□□ -0.37
ERCC4-208ENST00000576348 IGHV3-35A0A0C4DH35 117 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms