RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 OR4A16Q8NH70 328 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 TMEM170AQ8WVE7 144 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 ZNF414Q96IQ9 312 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 UBE2E2Q96LR5 201 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 OR4F4Q96R69 305 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 AIFM2Q9BRQ8 373 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 PSMG3Q9BT73 122 aaPredicted RBP6.08□□□□□ -1.44
CCDC40-215ENST00000576033 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 FBXL7Q9UJT9 491 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 PRNDQ9UKY0 176 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 IGHV3-35A0A0C4DH35 117 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 BMPR1BO00238 502 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 CRYGCP07315 174 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 METTL15P1P0C7V9 234 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 CD33P20138 364 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 HSPE1P61604 102 aaKnown RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 HBG1P69891 147 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 HBG2P69892 147 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 ATP6V1FQ16864 119 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 BSXQ3C1V8 233 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 TOR2AQ5JU69 321 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 UQCC3Q6UW78 93 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 IL34Q6ZMJ4 242 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 OR1L8Q8NGR8 309 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 OR1N2Q8NGR9 330 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 DLX4Q92988 240 aaPredicted RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 CITED4Q96RK1 184 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 SH3BGRL3Q9H299 93 aa6.07□□□□□ -1.44
CCDC40-215ENST00000576033 MRPL36Q9P0J6 103 aaKnown RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 STRAPQ9Y3F4 350 aaKnown RBP6.07□□□□□ -1.44
CCDC40-215ENST00000576033 IGHV3OR16-8A0A075B7F1 116 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 ZNF705EA8MWA4 302 aaPredicted RBP6.06□□□□□ -1.44
CCDC40-215ENST00000576033 UMAD1C9J7I0 102 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 LINC01619G3V211 115 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 H3BUA1 57 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 K7EIM0 57 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 IFNA17P01571 189 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 GPR183P32249 361 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 HOXA1P49639 335 aaPredicted RBP6.06□□□□□ -1.44
CCDC40-215ENST00000576033 ATP5IP56385 69 aaPredicted RBP6.06□□□□□ -1.44
CCDC40-215ENST00000576033 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 BLOC1S1P78537 153 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 RUNX1Q01196 453 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 SLC38A11Q08AI6 406 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 ZNF616Q08AN1 781 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 SPANXN5Q5MJ07 72 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 PXDC1Q5TGL8 231 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 DPPA3Q6W0C5 159 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 TMEM217Q8N7C4 229 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 HSD17B11Q8NBQ5 300 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 OR2G3Q8NGZ4 309 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 OR5B3Q8NH48 314 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 MARC2Q969Z3 335 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 MISP3Q96FF7 219 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 TMEM147Q9BVK8 224 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 GGACTQ9BVM4 153 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 SCRT1Q9BWW7 348 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 WDR61Q9GZS3 305 aaKnown RBP6.06□□□□□ -1.44
CCDC40-215ENST00000576033 PLEKHA3Q9HB20 300 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 TIMM9Q9Y5J7 89 aa6.06□□□□□ -1.44
CCDC40-215ENST00000576033 F11RQ9Y624 299 aaKnown RBP6.06□□□□□ -1.44
CCDC40-215ENST00000576033 OR2T8A6NH00 312 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 CEBPZOSA8MTT3 80 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 KRBOX1C9JBD0 128 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 FNDC10F2Z333 226 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 RNASE2P10153 161 aaKnown RBP6.05□□□□□ -1.44
CCDC40-215ENST00000576033 DEFA4P12838 97 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 ZP3P21754 424 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 MYCNOSP40205 109 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 ATP5G2Q06055 141 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 MLANAQ16655 118 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 PVRIGQ6DKI7 326 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 SLC25A24Q6NUK1 477 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 ZNF343Q6P1L6 599 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 CACNG8Q8WXS5 425 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 PINX1Q96BK5 328 aaKnown RBP6.05□□□□□ -1.44
CCDC40-215ENST00000576033 FKBP11Q9NYL4 201 aa6.05□□□□□ -1.44
CCDC40-215ENST00000576033 TRAV1-1A0A0B4J248 108 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 FAM223BA6NKX1 122 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 IFNA5P01569 189 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 HSPB1P04792 205 aaKnown RBP6.04□□□□□ -1.44
CCDC40-215ENST00000576033 CD5P06127 495 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 SYNJ2BPP57105 145 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 RPP30P78346 268 aaKnown RBP6.04□□□□□ -1.44
CCDC40-215ENST00000576033 DLK1P80370 383 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 SERF2P84101 59 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 C10orf91Q5T1B1 145 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 SPSB3Q6PJ21 355 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 UNQ9165/PRO28630Q6UXU0 137 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
CCDC40-215ENST00000576033 Q6ZRG5 221 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms