RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 TFPI2P48307 235 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 CMC4P56277 68 aaPredicted RBP14.54□□□□□ -0.08
SCARF1-208ENST00000574545 SRPXP78539 464 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 ZNF124Q15973 351 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 APRG1Q8IVJ8 170 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 TP53TG1Q9Y2A0 90 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 U3KQ87 197 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 U3KQE9 123 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 IGHV3-66A0A0C4DH42 116 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 DUXBA0A1W2PPF3 345 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 UBE2CO00762 179 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 NPPCP23582 126 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 BMI1P35226 326 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 RND2P52198 227 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 APOC4P55056 127 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 TMED4Q7Z7H5 227 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 GBGT1Q8N5D6 347 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 OR1S2Q8NGQ3 325 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 DTD1Q8TEA8 209 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 MS4A6AQ9H2W1 248 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 RBKSQ9H477 322 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 MAP6D1Q9H9H5 199 aa14.53□□□□□ -0.08
SCARF1-208ENST00000574545 TRAV2A0A0B4J234 112 aa14.52□□□□□ -0.09
SCARF1-208ENST00000574545 YPEL3P61236 119 aaPredicted RBP14.52□□□□□ -0.09
SCARF1-208ENST00000574545 PAFAH1B2P68402 229 aa14.52□□□□□ -0.09
SCARF1-208ENST00000574545 BAK1Q16611 211 aa14.52□□□□□ -0.09
SCARF1-208ENST00000574545 NOXA1Q86UR1 476 aa14.52□□□□□ -0.09
SCARF1-208ENST00000574545 A0A1W2PS18 150 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 RPL35AP18077 110 aaKnown RBP14.51□□□□□ -0.09
SCARF1-208ENST00000574545 OR10J1P30954 320 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 SPANXN2Q5MJ10 180 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 ETFRF1Q6IPR1 90 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 IL17DQ8TAD2 202 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 NPIPB3Q92617 1050 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 RNF183Q96D59 192 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 METTL26Q96S19 204 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 SDHCQ99643 169 aaPredicted RBP14.51□□□□□ -0.09
SCARF1-208ENST00000574545 TMEM231Q9H6L2 316 aa14.51□□□□□ -0.09
SCARF1-208ENST00000574545 PIGBOS1A0A0B4J2F0 54 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 LCE6AA0A183 80 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 SPRY2O43597 315 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 SCGB2A1O75556 95 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 SFT2D2O95562 160 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 IFNA10P01566 189 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 SLC25A6P12236 298 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 ATP5IP56385 69 aaPredicted RBP14.5□□□□□ -0.09
SCARF1-208ENST00000574545 PPP1R1AQ13522 171 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 RBMS2Q15434 407 aaKnown RBP14.5□□□□□ -0.09
SCARF1-208ENST00000574545 DEFB135Q30KP9 77 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 FAM24BQ8N5W8 94 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 STPG3Q8N7X2 389 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 Q8WTZ3 238 aa14.5□□□□□ -0.09
SCARF1-208ENST00000574545 OR1S1Q8NH92 325 aa14.49□□□□□ -0.09
SCARF1-208ENST00000574545 VAMP1P23763 118 aa14.48□□□□□ -0.09
SCARF1-208ENST00000574545 P2RY1P47900 373 aa14.48□□□□□ -0.09
SCARF1-208ENST00000574545 USF2Q15853 346 aaPredicted RBP14.48□□□□□ -0.09
SCARF1-208ENST00000574545 CSTL1Q9H114 145 aa14.48□□□□□ -0.09
SCARF1-208ENST00000574545 TMED3Q9Y3Q3 217 aa14.48□□□□□ -0.09
SCARF1-208ENST00000574545 FAM90A26D6RGX4 464 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 K7EQG2 157 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 DNASE2O00115 360 aaPredicted RBP14.47□□□□□ -0.09
SCARF1-208ENST00000574545 TOMM40O96008 361 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 GPX4P36969 197 aaPredicted RBP14.47□□□□□ -0.09
SCARF1-208ENST00000574545 EWSR1Q01844 656 aaKnown RBP eCLIP14.47□□□□□ -0.09
SCARF1-208ENST00000574545 C16orf54Q6UWD8 224 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 CENPSQ8N2Z9 138 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 DCANP1Q8TF63 244 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 ACY3Q96HD9 319 aa14.47□□□□□ -0.09
SCARF1-208ENST00000574545 IGKV1D-37A0A075B6S9 117 aa14.46□□□□□ -0.09
SCARF1-208ENST00000574545 NAP1L6A6NFF2 107 aa14.46□□□□□ -0.09
SCARF1-208ENST00000574545 DEFB131AP59861 70 aa14.46□□□□□ -0.09
SCARF1-208ENST00000574545 UBE2MP61081 183 aaKnown RBP14.46□□□□□ -0.09
SCARF1-208ENST00000574545 RPL11P62913 178 aaKnown RBP14.46□□□□□ -0.09
SCARF1-208ENST00000574545 GLMPQ8WWB7 406 aa14.46□□□□□ -0.09
SCARF1-208ENST00000574545 A0A0J9YWU9 116 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 NDUFB6O95139 128 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 IFNA4P05014 189 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 HNRNPCP07910 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCARF1-208ENST00000574545 RD3LP0DJH9 198 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 PSG1P11464 419 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 BTCP35070 178 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 GAMTQ14353 236 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 LYG2Q86SG7 212 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 GRAMD2BQ96HH9 432 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 RABAC1Q9UI14 185 aa14.45□□□□□ -0.1
SCARF1-208ENST00000574545 C9orf170A2RU37 121 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 MPTX1A8MV57 137 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 BUB3O43684 328 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 IL4P05112 153 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 HOXB5P09067 269 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 GGNBP1Q5YKI7 109 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 TRIQKQ629K1 86 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 LEMD1Q68G75 181 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 STXBP6Q8NFX7 210 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 NARS2Q96I59 477 aaKnown RBP14.44□□□□□ -0.1
SCARF1-208ENST00000574545 FLVCR2Q9UPI3 526 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 AGRNO00468 2067 aa14.44□□□□□ -0.1
SCARF1-208ENST00000574545 IAPPP10997 89 aa14.43□□□□□ -0.1
SCARF1-208ENST00000574545 ATF4P18848 351 aaPredicted RBP14.43□□□□□ -0.1
SCARF1-208ENST00000574545 HELTA6NFD8 242 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms