RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TMED4Q7Z7H5 227 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 LGI3Q8N145 548 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 METTL26Q96S19 204 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 RBM38Q9H0Z9 239 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 TP53TG1Q9Y2A0 90 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 NPY1RP25929 384 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 AP3S2P59780 193 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 TNFRSF9Q07011 255 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 SMCO1Q147U7 214 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 TMEM231Q9H6L2 316 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 CACFD1Q9UGQ2 172 aa19.22■□□□□ 0.67
NPLOC4-215ENST00000574095 DNAH1Q9P2D7 4330 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 A0A1W2PS18 150 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 IGLC1P0CG04 106 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 SLC25A4P12235 298 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 CCDC190Q86UF4 302 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 OR1S2Q8NGQ3 325 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 RNF183Q96D59 192 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 RBKSQ9H477 322 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 HSPB7Q9UBY9 170 aa19.21■□□□□ 0.67
NPLOC4-215ENST00000574095 A0A0J9YWU9 116 aa19.2■□□□□ 0.66
NPLOC4-215ENST00000574095 IFNA10P01566 189 aa19.2■□□□□ 0.66
NPLOC4-215ENST00000574095 CRYBB3P26998 211 aa19.2■□□□□ 0.66
NPLOC4-215ENST00000574095 RBMS2Q15434 407 aaKnown RBP19.2■□□□□ 0.66
NPLOC4-215ENST00000574095 FAM24BQ8N5W8 94 aa19.2■□□□□ 0.66
NPLOC4-215ENST00000574095 OR10J1P30954 320 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 SRPXP78539 464 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 TMEM128Q5BJH2 165 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 ETFRF1Q6IPR1 90 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 LYG2Q86SG7 212 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 NOXA1Q86UR1 476 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 DTD1Q8TEA8 209 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 Q8WTZ3 238 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 CSTL1Q9H114 145 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 RABAC1Q9UI14 185 aa19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 PLECQ15149 4684 aaKnown RBP19.19■□□□□ 0.66
NPLOC4-215ENST00000574095 P2RY1P47900 373 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 DEFB131AP59861 70 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 LEMD1Q68G75 181 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 OR1S1Q8NH92 325 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 NPIPB3Q92617 1050 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 ACY3Q96HD9 319 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 U3KQ87 197 aa19.18■□□□□ 0.66
NPLOC4-215ENST00000574095 YPEL3P61236 119 aaPredicted RBP19.17■□□□□ 0.66
NPLOC4-215ENST00000574095 EWSR1Q01844 656 aaKnown RBP eCLIP19.17■□□□□ 0.66
NPLOC4-215ENST00000574095 NARS2Q96I59 477 aaKnown RBP19.17■□□□□ 0.66
NPLOC4-215ENST00000574095 TRAV2A0A0B4J234 112 aa19.16■□□□□ 0.66
NPLOC4-215ENST00000574095 MPTX1A8MV57 137 aa19.16■□□□□ 0.66
NPLOC4-215ENST00000574095 VAMP1P23763 118 aa19.16■□□□□ 0.66
NPLOC4-215ENST00000574095 STXBP6Q8NFX7 210 aa19.16■□□□□ 0.66
NPLOC4-215ENST00000574095 SLC25A21Q9BQT8 299 aaPredicted RBP19.16■□□□□ 0.66
NPLOC4-215ENST00000574095 U3KQE9 123 aa19.15■□□□□ 0.66
NPLOC4-215ENST00000574095 ZNF701M0R085 212 aaPredicted RBP19.14■□□□□ 0.65
NPLOC4-215ENST00000574095 SPANXN2Q5MJ10 180 aa19.14■□□□□ 0.65
NPLOC4-215ENST00000574095 DEDD2Q8WXF8 326 aa19.14■□□□□ 0.65
NPLOC4-215ENST00000574095 GRAMD2BQ96HH9 432 aa19.14■□□□□ 0.65
NPLOC4-215ENST00000574095 SRRQ9GZT4 340 aa19.14■□□□□ 0.65
NPLOC4-215ENST00000574095 DUXBA0A1W2PPF3 345 aa19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 K7EQG2 157 aa19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 PITX3O75364 302 aa19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 IFNA4P05014 189 aa19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 HNRNPCP07910 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 PMS2P11Q13670 270 aa19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 USF2Q15853 346 aaPredicted RBP19.13■□□□□ 0.65
NPLOC4-215ENST00000574095 PIGBOS1A0A0B4J2F0 54 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 SFT2D2O95562 160 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 IL4P05112 153 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 RD3LP0DJH9 198 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 PPP1R1AQ13522 171 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 LRTM2Q8N967 370 aa19.12■□□□□ 0.65
NPLOC4-215ENST00000574095 HYDINQ4G0P3 5121 aa19.11■□□□□ 0.65
NPLOC4-215ENST00000574095 CXorf65A6NEN9 183 aa19.11■□□□□ 0.65
NPLOC4-215ENST00000574095 JTBO76095 146 aa19.11■□□□□ 0.65
NPLOC4-215ENST00000574095 TOMM40O96008 361 aa19.11■□□□□ 0.65
NPLOC4-215ENST00000574095 C16orf54Q6UWD8 224 aa19.11■□□□□ 0.65
NPLOC4-215ENST00000574095 IAPPP10997 89 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 PSG1P11464 419 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 BAK1Q16611 211 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 CENPSQ8N2Z9 138 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 DCANP1Q8TF63 244 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 GLMPQ8WWB7 406 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 AGRNO00468 2067 aa19.1■□□□□ 0.65
NPLOC4-215ENST00000574095 CA1P00915 261 aaPredicted RBP19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 HOXB5P09067 269 aa19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 ZNF688P0C7X2 276 aa19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 ATP5IP56385 69 aaPredicted RBP19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 STHQ8IWL8 128 aa19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 GATAD1Q8WUU5 269 aa19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 RARRES2Q99969 163 aa19.09■□□□□ 0.65
NPLOC4-215ENST00000574095 ALMS1Q8TCU4 4167 aa19.08■□□□□ 0.65
NPLOC4-215ENST00000574095 HELTA6NFD8 242 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 SLC25A6P12236 298 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 GPX4P36969 197 aaPredicted RBP19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 INPP1P49441 399 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 EIF2B2P49770 351 aaKnown RBP19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 DHRS2Q13268 280 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 GAMTQ14353 236 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 OR51G1Q8NGK1 321 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 TMED3Q9Y3Q3 217 aa19.08■□□□□ 0.64
NPLOC4-215ENST00000574095 OR11H2Q8NH07 326 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms