RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 K7EMT4 169 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 SSSCA1O60232 199 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 FOLR2P14207 255 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 CBLN1P23435 193 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 LCN12Q6JVE5 192 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 C11orf87Q6NUJ2 197 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 PRSS54Q6PEW0 395 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 UNQ9165/PRO28630Q6UXU0 137 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 OR1S2Q8NGQ3 325 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 TMEM190Q8WZ59 177 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 SLC35E1Q96K37 410 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 NMES1Q9C002 83 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 DAZ1Q9NQZ3 744 aaKnown RBP8.38□□□□□ -1.07
CHD3-216ENST00000573936 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
CHD3-216ENST00000573936 TMEM213A2RRL7 107 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 L7N2F9 121 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 TSC22D2O75157 780 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 YIF1AO95070 293 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 MBPP02686 304 aaPredicted RBP8.37□□□□□ -1.07
CHD3-216ENST00000573936 GIPP09681 153 aaPredicted RBP8.37□□□□□ -1.07
CHD3-216ENST00000573936 C8orf88P0DMB2 117 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
CHD3-216ENST00000573936 OR10J1P30954 320 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 RND2P52198 227 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 VAMP2P63027 116 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 CYCSP99999 105 aaKnown RBP8.37□□□□□ -1.07
CHD3-216ENST00000573936 TM4SF20Q53R12 229 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 NPIPB3Q92617 1050 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 C20orf24Q9BUV8 137 aa8.37□□□□□ -1.07
CHD3-216ENST00000573936 SCAF4O95104 1147 aaKnown RBP8.36□□□□□ -1.07
CHD3-216ENST00000573936 RLN2P04090 185 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 GP9P14770 177 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 BMI1P35226 326 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 YPEL3P61236 119 aaPredicted RBP8.36□□□□□ -1.07
CHD3-216ENST00000573936 RAB32Q13637 225 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 Q8WTZ3 238 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
CHD3-216ENST00000573936 MRPL36Q9P0J6 103 aaKnown RBP8.36□□□□□ -1.07
CHD3-216ENST00000573936 RCL1Q9Y2P8 373 aaKnown RBP8.36□□□□□ -1.07
CHD3-216ENST00000573936 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
CHD3-216ENST00000573936 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD3-216ENST00000573936 TRAV14DV4A0A0A6YYC5 116 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 TRAV25A0A0B4J276 109 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 H3BP45 60 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 K7EPK0 472 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 FABP1P07148 127 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 PAX9P55771 341 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 S100A10P60903 97 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 RAP2BP61225 183 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 GAMTQ14353 236 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 TIGITQ495A1 244 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 TOMM20LQ6UXN7 152 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 TMEM14EPQ6UXP3 125 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 ADAMTSL5Q6ZMM2 481 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 OR10P1Q8NGE3 313 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 PPP1R1CQ8WVI7 109 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 ASB13Q8WXK3 278 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 ST6GAL2Q96JF0 529 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
CHD3-216ENST00000573936 WI2-2373I1.2A0A1W2PRP0 233 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 ZFP92A6NM28 416 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 G3V3Q6 166 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 K7EIL1 84 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 CCNKO75909 580 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 TOMM40O96008 361 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 RD3LP0DJH9 198 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 NPPCP23582 126 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 CD300EQ496F6 205 aaPredicted RBP8.34□□□□□ -1.07
CHD3-216ENST00000573936 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 Q5BKY6 102 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 LAMTOR1Q6IAA8 161 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 OR8G2PQ6IF36 304 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 HAPLN4Q86UW8 402 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.07
CHD3-216ENST00000573936 PRR25Q96S07 402 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 TMEM231Q9H6L2 316 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 MLXQ9UH92 298 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 SMPXQ9UHP9 88 aa8.34□□□□□ -1.07
CHD3-216ENST00000573936 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 IGHV7-4-1A0A0J9YVY3 117 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 A0A1W2PS18 150 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 PRSS46E5RG02 174 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 FNDC10F2Z333 226 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 H0YIZ8 118 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 SMLR1H3BR10 107 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 ZNF207O43670 478 aaKnown RBP8.33□□□□□ -1.08
CHD3-216ENST00000573936 MPC2O95563 127 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 CD5P06127 495 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 METTL15P1P0C7V9 234 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 DLK1P80370 383 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 CD300CQ08708 224 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 RBPMS2Q6ZRY4 209 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms