RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 GNG5P63218 68 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 MEF2CQ06413 473 aaPredicted RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 DIAPH2-AS1Q14236 149 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 DYSFO75923 2080 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 RP1L1Q8IWN7 2480 aaPredicted RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 GPR6P46095 362 aaPredicted RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 CAMPP49913 170 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 HNRNPA3P51991 378 aaKnown RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 LCN12Q6JVE5 192 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 ZCCHC24Q8N2G6 241 aaKnown RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 KLHDC1Q8N7A1 406 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 DEFB124Q8NES8 71 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
NUP88-207ENST00000573584 PPIAL4AQ9Y536 164 aa12.62□□□□□ -0.39
NUP88-207ENST00000573584 FSTL3O95633 263 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 CRYABP02511 175 aaKnown RBP12.61□□□□□ -0.39
NUP88-207ENST00000573584 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 HIST1H1EP10412 219 aaKnown RBP12.61□□□□□ -0.39
NUP88-207ENST00000573584 C1orf185Q5T7R7 199 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 OR4A5Q8NH83 315 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 ARFGEF3Q5TH69 2177 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 TNFRSF1AP19438 455 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 UBE2G1P62253 170 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 SAP30LQ9HAJ7 183 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 CORTO00230 105 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 LINC00614P0C842 121 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 ORM2P19652 201 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
NUP88-207ENST00000573584 LAMA5O15230 3695 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 M0R2Z0 102 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 CEACAM4O75871 244 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 STPG4Q8N801 248 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 H1FXQ92522 213 aaKnown RBP12.6□□□□□ -0.39
NUP88-207ENST00000573584 ALKBH7Q9BT30 221 aaPredicted RBP12.6□□□□□ -0.39
NUP88-207ENST00000573584 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
NUP88-207ENST00000573584 MYCNOSP40205 109 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
NUP88-207ENST00000573584 PMCHL1Q16048 86 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 ZNF841Q6ZN19 808 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
NUP88-207ENST00000573584 PGPA6NDG6 321 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 VWC2LB2RUY7 222 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 FCN3O75636 299 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 IGLV2-23P01705 113 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 RNASEKQ6P5S7 137 aaKnown RBP12.59□□□□□ -0.39
NUP88-207ENST00000573584 LHFPL4Q7Z7J7 247 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 SLC25A17O43808 307 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 STXBP6Q8NFX7 210 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 TMEM186Q96B77 213 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
NUP88-207ENST00000573584 OR2J3O76001 311 aa12.58□□□□□ -0.39
NUP88-207ENST00000573584 MOSP00540 346 aa12.58□□□□□ -0.39
NUP88-207ENST00000573584 EBLN2Q6P2I7 272 aa12.58□□□□□ -0.39
NUP88-207ENST00000573584 NUP37Q8NFH4 326 aa12.58□□□□□ -0.39
NUP88-207ENST00000573584 OR2D3Q8NGH3 330 aa12.58□□□□□ -0.39
NUP88-207ENST00000573584 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 C17orf100A8MU93 164 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
NUP88-207ENST00000573584 Q56UQ5 140 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 PERPQ96FX8 193 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 PRR31Q5SQ13 230 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 HCP5Q6MZN7 132 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 TMEM108Q6UXF1 575 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 ATP5L2Q7Z4Y8 100 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 GPR82Q96P67 336 aa12.58□□□□□ -0.4
NUP88-207ENST00000573584 C22orf46C9J442 243 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 SIAH2O43255 324 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 VMA21Q3ZAQ7 101 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 RUSC1-AS1Q66K80 236 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 RITA1Q96K30 269 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 TSPOP30536 169 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms