RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 LINC00305Q7Z4B0 112 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 SGK494Q96LW2 274 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 GNB4Q9HAV0 340 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 CBLN4Q9NTU7 201 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 DCHS2Q6V1P9 2916 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 CDKN1AP38936 164 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 MRGPRG-AS1Q2M3A8 158 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 C11orf42Q8N5U0 333 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 OR4A5Q8NH83 315 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 SVEP1Q4LDE5 3571 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 VSTM5A8MXK1 200 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 BPIFB3P59826 476 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 RANP62826 216 aaKnown RBP9.02□□□□□ -0.97
RPAIN-212ENST00000573126 GNG5P63218 68 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 TDRG1Q3Y452 100 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 LINC00311Q8N616 119 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 FAM103A1Q9BTL3 118 aaKnown RBP9.02□□□□□ -0.97
RPAIN-212ENST00000573126 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 IGLC7A0M8Q6 106 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 C22orf46C9J442 243 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 EREGO14944 169 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 FOSL1P15407 271 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 TNXAQ16473 311 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 FAM71F2Q6NXP2 309 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 TMEM136Q6ZRR5 245 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 ASCL5Q7RTU5 278 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 BLNKQ8WV28 456 aa9.02□□□□□ -0.97
RPAIN-212ENST00000573126 ANKHD1Q8IWZ3 2542 aaKnown RBP9.02□□□□□ -0.97
RPAIN-212ENST00000573126 TRBV9A0A0B4J1U6 114 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF137PP52743 207 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 MFAP2P55001 183 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF329Q86UD4 541 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 OR1L4Q8NGR5 311 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 RNF2Q99496 336 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 TMEM133Q9H2Q1 129 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 TNFRSF19Q9NS68 423 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 PTPRQQ9UMZ3 2332 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 PEX7O00628 323 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 FSTL3O95633 263 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 MC5RP33032 325 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 C1orf194Q5T5A4 169 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 C8orf31Q8N9H6 132 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 FXYD5Q96DB9 178 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 RCHY1Q96PM5 261 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 RPH3ALQ9UNE2 315 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
RPAIN-212ENST00000573126 SMIM27A0A1W2PRY6 76 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 H3BTX0 84 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 ESDP10768 282 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 Q0VG73 95 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 LEMD1Q68G75 181 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 WDR73Q6P4I2 378 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 THAP8Q8NA92 274 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 BEND2Q8NDZ0 799 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 VN1R17PQ8TDU5 208 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 GSX1Q9H4S2 264 aaPredicted RBP9□□□□□ -0.97
RPAIN-212ENST00000573126 KAAG1Q9UBP8 84 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 IGHV2-26A0A0B4J1V2 119 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
RPAIN-212ENST00000573126 BMPR1BO00238 502 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 MT-ND6P03923 174 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 SRIP30626 198 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 RPL19P84098 196 aaKnown RBP9□□□□□ -0.97
RPAIN-212ENST00000573126 TPTE2P1Q5T6R2 138 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 NGBQ9NPG2 151 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF835Q9Y2P0 537 aa9□□□□□ -0.97
RPAIN-212ENST00000573126 KIR2DL5BA0A0G2JN68 375 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 KIR2DL5BA0A0G2JPC4 375 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF253O75346 499 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 AMY1AP04745 511 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 LGALS7P47929 136 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 TAS2R60P59551 318 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 PRR31Q5SQ13 230 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 KIR2DL5AQ8N109 375 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 C2orf88Q9BSF0 95 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 PMCHP20382 165 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 COX7A1P24310 79 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 RPL27AP46776 148 aaKnown RBP8.99□□□□□ -0.97
RPAIN-212ENST00000573126 SLAQ13239 276 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 SPACA3Q8IXA5 215 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 SIGLECL1Q8N7X8 197 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 PAM16Q9Y3D7 125 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 INSIG2Q9Y5U4 225 aa8.99□□□□□ -0.97
RPAIN-212ENST00000573126 FAM87AP0C7U9 286 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 APOBEC3AP31941 199 aaPredicted RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 BRS3P32247 399 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 AMTP48728 403 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 KRTDAPP60985 99 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 NUDT10Q8NFP7 164 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms