RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ZNF286BP0CG31 522 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 PYYP10082 97 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 PTHLHP12272 177 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 NPPCP23582 126 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 RPL27AP46776 148 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 RPL18Q07020 188 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 CATR1Q13166 79 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 TMEM155Q4W5P6 130 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 AAED1Q7RTV5 226 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 GTSCR1Q86UQ5 136 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 SAXO1Q8IYX7 474 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 PACRGLQ8N7B6 248 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 DPH3Q96FX2 82 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 C1orf147Q96MC9 270 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 NAA60Q9H7X0 242 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 C21orf62Q9NYP8 219 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 SBF1O95248 1867 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 BCORL1Q5H9F3 1711 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 PIK3C2AO00443 1686 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 KDM5AP29375 1690 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 TRGV10A0A0A0MS01 117 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 FSHBP01225 129 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 IGLV3-25P01717 112 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF19P17023 458 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 CRYBB3P26998 211 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 AKR1C1Q04828 323 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 PYY3Q5JQD4 70 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF678Q5SXM1 525 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 FAM104BQ5XKR9 115 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 TEN1Q86WV5 123 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 AMN1Q8IY45 258 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF101Q8IZC7 436 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 Q8N377 158 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 KCNRGQ8N5I3 272 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 LINC00311Q8N616 119 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 MORN4Q8NDC4 146 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 ITLN2Q8WWU7 325 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 PRELID3AQ96N28 172 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 MCEEQ96PE7 176 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF586Q9NXT0 402 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 CELA1Q9UNI1 258 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 NOP16Q9Y3C1 178 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 BAZ1AQ9NRL2 1556 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 RALGAPA2Q2PPJ7 1873 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 CDK5RAP2Q96SN8 1893 aa3.53□□□□□ -1.84
TOPBP1-210ENST00000572787 NRKQ7Z2Y5 1582 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 TRAV12-2A0A075B6T6 113 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 A0A1B0GVX0 72 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 OR51F1A6NGY5 319 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 KLF7O75840 302 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 INSP01308 110 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 SLC25A5P05141 298 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 IFITM1P13164 125 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 RNASE4P34096 147 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 CRISP3P54108 245 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 LSM3P62310 102 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 LINC01545Q5VT33 79 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 C11orf87Q6NUJ2 197 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 SVBPQ8N300 66 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 C14orf178Q8N769 122 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 BPIFB6Q8NFQ5 453 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 OR4B1Q8NGF8 309 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 WFDC5Q8TCV5 224 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 HIST1H2BLQ99880 126 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 PLA2G12AQ9BZM1 189 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 PLA2G2FQ9BZM2 168 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 FAM60AQ9NP50 221 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 OSTCQ9NRP0 149 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 TXNL4BQ9NX01 149 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 COMMD3Q9UBI1 195 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 PTPRTO14522 1441 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 RGS12O14924 1447 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 FER1L6Q2WGJ9 1857 aa3.52□□□□□ -1.85
TOPBP1-210ENST00000572787 ANKRD26Q9UPS8 1709 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 IGLV3-10A0A075B6K4 115 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 LEPROTO15243 131 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 HLA-DQA1P01909 254 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 KRTAP10-2P60368 255 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 UBA52P62987 128 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF90Q03938 601 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 TMEM91Q6ZNR0 172 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 SPATA12Q7Z6I5 190 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 PCP2Q8IVA1 136 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 HIST3H2BBQ8N257 126 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 C10orf111Q8N326 155 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 ZFAND2AQ8N6M9 145 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 WFDC11Q8NEX6 87 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 NPCDR1Q9BY65 106 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 SAR1AQ9NR31 198 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 MED9Q9NWA0 146 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF580Q9UK33 172 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 EPDR1Q9UM22 224 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF443Q9Y2A4 671 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 YEATS2Q9ULM3 1422 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms