RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SYNGR2O43760 224 aa15.5■□□□□ 0.07
CHMP6-204ENST00000572778 ATP5IP56385 69 aaPredicted RBP15.5■□□□□ 0.07
CHMP6-204ENST00000572778 OR1S2Q8NGQ3 325 aa15.5■□□□□ 0.07
CHMP6-204ENST00000572778 NPIPB3Q92617 1050 aa15.5■□□□□ 0.07
CHMP6-204ENST00000572778 WDR12Q9GZL7 423 aaKnown RBP15.5■□□□□ 0.07
CHMP6-204ENST00000572778 ZFAND3Q9H8U3 227 aa15.5■□□□□ 0.07
CHMP6-204ENST00000572778 FAM240BA0A1B0GVZ2 78 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 WRBO00258 174 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 TSPAN4O14817 238 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 IGKV1-17P01599 117 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 OR10J1P30954 320 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 RAB11AP62491 216 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 MZT2BQ6NZ67 158 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 CIB3Q96Q77 187 aaPredicted RBP15.49■□□□□ 0.07
CHMP6-204ENST00000572778 RNF2Q99496 336 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 SPAG8Q99932 426 aaPredicted RBP15.49■□□□□ 0.07
CHMP6-204ENST00000572778 NUDT15Q9NV35 164 aa15.49■□□□□ 0.07
CHMP6-204ENST00000572778 IGLC1P0CG04 106 aa15.48■□□□□ 0.07
CHMP6-204ENST00000572778 Q8WTZ3 238 aa15.48■□□□□ 0.07
CHMP6-204ENST00000572778 ZMAT4Q9H898 229 aa15.48■□□□□ 0.07
CHMP6-204ENST00000572778 SRD5A3Q9H8P0 318 aa15.48■□□□□ 0.07
CHMP6-204ENST00000572778 TBC1D24Q9ULP9 559 aa15.48■□□□□ 0.07
CHMP6-204ENST00000572778 IGKV3-7A0A075B6H7 116 aa15.47■□□□□ 0.07
CHMP6-204ENST00000572778 IGHV3-66A0A0C4DH42 116 aa15.47■□□□□ 0.07
CHMP6-204ENST00000572778 H2AFB2P0C5Z0 115 aa15.47■□□□□ 0.07
CHMP6-204ENST00000572778 BMI1P35226 326 aa15.47■□□□□ 0.07
CHMP6-204ENST00000572778 RPP30P78346 268 aaKnown RBP15.47■□□□□ 0.07
CHMP6-204ENST00000572778 MITD1Q8WV92 249 aa15.47■□□□□ 0.07
CHMP6-204ENST00000572778 OR4C46A6NHA9 309 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 UPK1BO75841 260 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 APOHP02749 345 aaPredicted RBP15.46■□□□□ 0.07
CHMP6-204ENST00000572778 NPPCP23582 126 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 NKX2-1P43699 371 aaPredicted RBP15.46■□□□□ 0.07
CHMP6-204ENST00000572778 ST8SIA2Q92186 375 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 SLC35E1Q96K37 410 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 METTL26Q96S19 204 aa15.46■□□□□ 0.07
CHMP6-204ENST00000572778 GPX4P36969 197 aaPredicted RBP15.45■□□□□ 0.06
CHMP6-204ENST00000572778 YPEL3P61236 119 aaPredicted RBP15.45■□□□□ 0.06
CHMP6-204ENST00000572778 POLR2GP62487 172 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHMP6-204ENST00000572778 ID3Q02535 119 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 ASAH1Q13510 395 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 HAGHQ16775 308 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 IAH1Q2TAA2 248 aaPredicted RBP15.45■□□□□ 0.06
CHMP6-204ENST00000572778 SPANXN5Q5MJ07 72 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 TCF24Q7RTU0 167 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 OR4D5Q8NGN0 318 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 SEC22CQ9BRL7 303 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 UBQLN2Q9UHD9 624 aa15.45■□□□□ 0.06
CHMP6-204ENST00000572778 TFPI2P48307 235 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 GAMTQ14353 236 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 RCHY1Q96PM5 261 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 TM2D3Q9BRN9 247 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 TMEM231Q9H6L2 316 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 VSIRQ9H7M9 311 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 GSKIPQ9P0R6 139 aa15.44■□□□□ 0.06
CHMP6-204ENST00000572778 A0A1W2PS18 150 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 RBMY1BA6NDE4 496 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 RBMY1EA6NEQ0 496 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 H3BP45 60 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 SCGB1D2O95969 90 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 RBMY1DP0C7P1 496 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 RD3LP0DJH9 198 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 FAM90A2PQ658T7 463 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 LILRB2Q8N423 598 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 GBGT1Q8N5D6 347 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 ZNF431Q8TF32 576 aaPredicted RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 WWC2-AS2Q96NR7 200 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 STRAPQ9Y3F4 350 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 COL7A1Q02388 2944 aa15.43■□□□□ 0.06
CHMP6-204ENST00000572778 HUWE1Q7Z6Z7 4374 aaKnown RBP15.43■□□□□ 0.06
CHMP6-204ENST00000572778 ZFP92A6NM28 416 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 CCSO14618 274 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 SSSCA1O60232 199 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 DFFBO76075 338 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 TOMM40O96008 361 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 CD5P06127 495 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 CRYBB3P26998 211 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 RPL11P62913 178 aaKnown RBP15.42■□□□□ 0.06
CHMP6-204ENST00000572778 PAFAH1B2P68402 229 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 LINC00322Q6ZN03 302 aaPredicted RBP15.42■□□□□ 0.06
CHMP6-204ENST00000572778 ZBTB8BQ8NAP8 495 aaPredicted RBP15.42■□□□□ 0.06
CHMP6-204ENST00000572778 ENKURQ8TC29 256 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 PSENENQ9NZ42 101 aa15.42■□□□□ 0.06
CHMP6-204ENST00000572778 FAM25EA8MYX2 175 aa15.41■□□□□ 0.06
CHMP6-204ENST00000572778 IL4P05112 153 aa15.41■□□□□ 0.06
CHMP6-204ENST00000572778 IFITM3Q01628 133 aa15.41■□□□□ 0.06
CHMP6-204ENST00000572778 WFDC3Q8IUB2 231 aa15.41■□□□□ 0.06
CHMP6-204ENST00000572778 C12orf45Q8N5I9 185 aaPredicted RBP15.41■□□□□ 0.06
CHMP6-204ENST00000572778 SPATA25Q9BR10 227 aa15.41■□□□□ 0.06
CHMP6-204ENST00000572778 DNASE2O00115 360 aaPredicted RBP15.4■□□□□ 0.06
CHMP6-204ENST00000572778 PSG1P11464 419 aa15.4■□□□□ 0.06
CHMP6-204ENST00000572778 ODF3L2Q3SX64 289 aa15.4■□□□□ 0.06
CHMP6-204ENST00000572778 CITED4Q96RK1 184 aa15.4■□□□□ 0.06
CHMP6-204ENST00000572778 HNRNPCP07910 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHMP6-204ENST00000572778 P2RY1P47900 373 aa15.39■□□□□ 0.05
CHMP6-204ENST00000572778 ZNF90Q03938 601 aa15.39■□□□□ 0.05
CHMP6-204ENST00000572778 USF2Q15853 346 aaPredicted RBP15.39■□□□□ 0.05
CHMP6-204ENST00000572778 OR51G1Q8NGK1 321 aa15.39■□□□□ 0.05
CHMP6-204ENST00000572778 GRAMD2BQ96HH9 432 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms