RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
TSR1-202ENST00000571806 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
TSR1-202ENST00000571806 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
TSR1-202ENST00000571806 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
TSR1-202ENST00000571806 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
TSR1-202ENST00000571806 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 CD74P04233 296 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 C4BPBP20851 252 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 NPY1RP25929 384 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
TSR1-202ENST00000571806 SP6Q3SY56 376 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 TIGITQ495A1 244 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 OR52I2Q8NH67 350 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
TSR1-202ENST00000571806 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
TSR1-202ENST00000571806 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
TSR1-202ENST00000571806 GSTZ1O43708 216 aaPredicted RBP11.23□□□□□ -0.61
TSR1-202ENST00000571806 IGLC1P0CG04 106 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 P0DMU3 169 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 OR10J1P30954 320 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 DHODHQ02127 395 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 OR13C8Q8NGS7 320 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 RBPMSQ93062 196 aaKnown RBP11.23□□□□□ -0.61
TSR1-202ENST00000571806 NRN1Q9NPD7 142 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 PFDN2Q9UHV9 154 aa11.23□□□□□ -0.61
TSR1-202ENST00000571806 C14orf166Q9Y224 244 aaKnown RBP11.23□□□□□ -0.61
TSR1-202ENST00000571806 DEFB131BA0A096LNP1 70 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 TEX13DA0A0J9YY54 714 aaPredicted RBP11.22□□□□□ -0.61
TSR1-202ENST00000571806 RAB3DO95716 219 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 AMBPP02760 352 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
TSR1-202ENST00000571806 NUP62P37198 522 aaPredicted RBP11.22□□□□□ -0.61
TSR1-202ENST00000571806 RND2P52198 227 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 MEF2DQ14814 521 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
TSR1-202ENST00000571806 STEAP1BQ6NZ63 245 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 Q6ZRM9 215 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 GLYATL2Q8WU03 294 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 CLEC5AQ9NY25 188 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
TSR1-202ENST00000571806 MRPS10P82664 201 aaKnown RBP11.21□□□□□ -0.61
TSR1-202ENST00000571806 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
TSR1-202ENST00000571806 NDUFAF3Q9BU61 184 aa11.21□□□□□ -0.61
TSR1-202ENST00000571806 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.62
TSR1-202ENST00000571806 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.62
TSR1-202ENST00000571806 HERC2O95714 4834 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 CEBPZOSA8MTT3 80 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 BUB3O43684 328 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 GABARAPO95166 117 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 TOMM40O96008 361 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 IL4P05112 153 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 RD3LP0DJH9 198 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 SIGLEC15Q6ZMC9 328 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 OR4D10Q8NGI6 311 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 NEU1Q99519 415 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 AGRNO00468 2067 aa11.2□□□□□ -0.62
TSR1-202ENST00000571806 DISC1C4P0D8 188 aa11.19□□□□□ -0.62
TSR1-202ENST00000571806 H3BMM0 161 aa11.19□□□□□ -0.62
TSR1-202ENST00000571806 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
TSR1-202ENST00000571806 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
TSR1-202ENST00000571806 GPR107Q5VW38 600 aa11.19□□□□□ -0.62
TSR1-202ENST00000571806 SELENOHQ8IZQ5 122 aaKnown RBP11.19□□□□□ -0.62
TSR1-202ENST00000571806 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
TSR1-202ENST00000571806 U3KQ87 197 aa11.19□□□□□ -0.62
TSR1-202ENST00000571806 VPS13DQ5THJ4 4388 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
TSR1-202ENST00000571806 TMEM268Q5VZI3 342 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 IL22RA2Q969J5 263 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 GPR146Q96CH1 333 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 FAM210BQ96KR6 192 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 RABL2AQ9UBK7 228 aaPredicted RBP11.18□□□□□ -0.62
TSR1-202ENST00000571806 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 RABL2BQ9UNT1 228 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 KCNIP3Q9Y2W7 256 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 TMEM56-RWDD3S4R434 201 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
TSR1-202ENST00000571806 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
TSR1-202ENST00000571806 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
TSR1-202ENST00000571806 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms