RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 CYP2G1PQ6ZSU1 146 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 BPIFCQ8NFQ6 507 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 Q8WTZ3 238 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 SLC25A32Q9H2D1 315 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 UBQLN2Q9UHD9 624 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 RNF24Q9Y225 148 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 RNF114Q9Y508 228 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 ACANP16112 2415 aa9.27□□□□□ -0.92
CDRT1-206ENST00000571263 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.27□□□□□ -0.93
CDRT1-206ENST00000571263 IGHV3-21A0A0B4J1V1 117 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 MFSD2BA6NFX1 497 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-206ENST00000571263 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-206ENST00000571263 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF680Q8NEM1 530 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 RNF2Q99496 336 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 MGST2Q99735 147 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 GGTLC1Q9BX51 225 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 SLC45A2Q9UMX9 530 aa9.27□□□□□ -0.93
CDRT1-206ENST00000571263 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
CDRT1-206ENST00000571263 TGOLN2O43493 480 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 TOMM40O96008 361 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 CLEC3BP05452 202 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 RD3LP0DJH9 198 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 RAB14P61106 215 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 B2MP61769 119 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PRR20EP86478 221 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PRR20CP86479 221 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PRR20DP86480 221 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PRR20BP86481 221 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PRR20AP86496 221 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 OR51G1Q8NGK1 321 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PFDN5Q99471 154 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 SLC39A9Q9NUM3 307 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 MRPL36Q9P0J6 103 aaKnown RBP9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PEF1Q9UBV8 284 aaKnown RBP9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PFDN2Q9UHV9 154 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 PLXNB1O43157 2135 aa9.26□□□□□ -0.93
CDRT1-206ENST00000571263 IGKV1D-37A0A075B6S9 117 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 IGKV1OR2-108A0A075B7D4 117 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 RGS13O14921 159 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 IGHV3-48P01763 117 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
CDRT1-206ENST00000571263 CTSGP08311 255 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 M6PRP20645 277 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 SULT1A2P50226 295 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 PLP1P60201 277 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 BLOC1S1P78537 153 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 RUNX1Q01196 453 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 KIAA0141Q14154 515 aaPredicted RBP9.25□□□□□ -0.93
CDRT1-206ENST00000571263 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 CLEC19AQ6UXS0 136 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 STPG3Q8N7X2 389 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 TMED6Q8WW62 240 aa9.25□□□□□ -0.93
CDRT1-206ENST00000571263 SAT2Q96F10 170 aaPredicted RBP9.25□□□□□ -0.93
CDRT1-206ENST00000571263 OR2T8A6NH00 312 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
CDRT1-206ENST00000571263 TEX46H3BTG2 121 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 GGCTO75223 188 aaKnown RBP9.24□□□□□ -0.93
CDRT1-206ENST00000571263 OR2C1O95371 312 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 IGKV1-17P01599 117 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
CDRT1-206ENST00000571263 LINC00869P0C866 280 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 GPR183P32249 361 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 ARL3P36405 182 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 PROK1P58294 105 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 TIGITQ495A1 244 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 TMEM41BQ5BJD5 291 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 ALKAL2Q6UX46 152 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 LURAP1LQ8IV03 231 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 ACTR3CQ9C0K3 210 aaPredicted RBP9.24□□□□□ -0.93
CDRT1-206ENST00000571263 SH3BGRL3Q9H299 93 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
CDRT1-206ENST00000571263 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
CDRT1-206ENST00000571263 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
CDRT1-206ENST00000571263 PSG1P11464 419 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 RAB2AP61019 212 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 RHOBP62745 196 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 IFITM2Q01629 132 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 ZNF90Q03938 601 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 FAM106AQ4KMX7 169 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 TMEM182Q6ZP80 229 aaPredicted RBP9.23□□□□□ -0.93
CDRT1-206ENST00000571263 OR10G4Q8NGN3 311 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms