RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PRCDQ00LT1 54 aa9.21□□□□□ -0.94
PCDHGA4-201ENST00000571252 OR10J3Q5JRS4 329 aa9.21□□□□□ -0.94
PCDHGA4-201ENST00000571252 MYOZ3Q8TDC0 251 aa9.21□□□□□ -0.94
PCDHGA4-201ENST00000571252 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
PCDHGA4-201ENST00000571252 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.94
PCDHGA4-201ENST00000571252 LY6G6EA0A0G2JKS1 128 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SELLP14151 372 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 GNG5P63218 68 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SSC4DQ8WTU2 575 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 U3KQA8 63 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 A0A1B0GUT8 65 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SRRM5B3KS81 715 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 J3KRW8 73 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SNAI2O43623 268 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 CCL3L1P16619 93 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 TMEM136Q6ZRR5 245 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 FAM106CPP0CH98 169 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 GCSHP23434 173 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 ARF6P62330 175 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 FAM27E3Q08E93 113 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 CDPF1Q6NVV7 123 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 ABHD17AQ96GS6 310 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 FOXH1O75593 365 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 ERASQ7Z444 233 aa9.2□□□□□ -0.94
PCDHGA4-201ENST00000571252 SPANXN1Q5VSR9 72 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 IL4P05112 153 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 TRAV5A0A0B4J249 113 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 ZNF207O43670 478 aaKnown RBP9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 APOHP02749 345 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 FABP2P12104 132 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 AREGP15514 252 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 OR10W1Q8NGF6 305 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 LINC00312Q9Y6C7 94 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 SNCGO76070 127 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 Q1RN00 199 aa9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 PEF1Q9UBV8 284 aaKnown RBP9.19□□□□□ -0.94
PCDHGA4-201ENST00000571252 CD40P25942 277 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 PLP1P60201 277 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 CD177Q8N6Q3 437 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 PMCHL2Q9BQD1 86 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 EPDR1Q9UM22 224 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 B9A039 149 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 PF4V1P10720 104 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 PIMREGQ9BSJ6 248 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 HTN1P15515 57 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 MFAP4P55083 255 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 Q9H3A6 140 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 F11RQ9Y624 299 aaKnown RBP9.18□□□□□ -0.94
PCDHGA4-201ENST00000571252 IGHV1-18A0A0C4DH31 117 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 LCN12Q6JVE5 192 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 FBXL15Q9H469 300 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 MAP1LC3AQ9H492 121 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 FOXA2Q9Y261 457 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 YLPM1P49750 1951 aaKnown RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 EML6Q6ZMW3 1958 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 MLNRO43193 412 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 TYMSP04818 313 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 CX3CL1P78423 397 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 MEF2CQ06413 473 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 MBNL2Q5VZF2 373 aaKnown RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 NIT1Q86X76 327 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 CLEC7AQ9BXN2 247 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 PPIAL4CA0A0B4J2A2 164 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 GPX1P07203 203 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 PPIAL4GP0DN37 164 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 LOXL3P58215 753 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 FMC1Q96HJ9 113 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 TCRBV4S1A1TA0A5B7 111 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 CIDEAO60543 219 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 MYOD1P15172 320 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 TDGF1P3P51864 188 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 FAM53AQ6NSI3 398 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 NUDT10Q8NFP7 164 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 NUDT11Q96G61 164 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 ZNF257Q9Y2Q1 563 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 GTF3C1Q12789 2109 aa9.17□□□□□ -0.94
PCDHGA4-201ENST00000571252 IGHV3-35A0A0C4DH35 117 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 ZNF841Q6ZN19 808 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 TSKUQ8WUA8 353 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 A1L4Q6 167 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 PDLIM4P50479 330 aa9.16□□□□□ -0.94
PCDHGA4-201ENST00000571252 RPUSD1Q9UJJ7 312 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms