RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NDPQ00604 133 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 EXOSC2Q13868 293 aaKnown RBP5.04□□□□□ -1.6
CHD3-213ENST00000571249 CLLU1Q5K131 121 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 PRSS54Q6PEW0 395 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 FAM219AQ8IW50 185 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 LGI3Q8N145 548 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TCTEX1D1Q8N7M0 179 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 RFESDQ8TAC1 157 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 THAP6Q8TBB0 222 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 NEK7Q8TDX7 302 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 IL22RA2Q969J5 263 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 SEC22AQ96IW7 307 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 OR10C1Q96KK4 312 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 PDCD10Q9BUL8 212 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TMEM222Q9H0R3 208 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 MED9Q9NWA0 146 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 IDI2-AS1Q9NZ38 188 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 OR2W1Q9Y3N9 320 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TMED3Q9Y3Q3 217 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 IGKV1D-13A0A0B4J2D9 117 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 C3orf85A0A1B0GTC6 90 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 C5orf51A6NDU8 294 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 BCL2L11O43521 198 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 CDS2O95674 445 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 CFDP00746 253 aaPredicted RBP5.03□□□□□ -1.6
CHD3-213ENST00000571249 IFNA21P01568 189 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 OR5AC1P0C628 307 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 CGB3P0DN86 165 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 CGB7P0DN87 165 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 IGKV1-13P0DP09 117 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 UCP1P25874 307 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 FCGR2BP31994 310 aaPredicted RBP5.03□□□□□ -1.6
CHD3-213ENST00000571249 FUSP35637 526 aaKnown RBP eCLIP5.03□□□□□ -1.6
CHD3-213ENST00000571249 HTR2BP41595 481 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 RPEL1Q2QD12 228 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 GGNBP1Q5YKI7 109 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 Q6ZSN1 163 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 OR10J5Q8NHC4 309 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 STOML3Q8TAV4 291 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 SCARB1Q8WTV0 552 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 PHYHIPLQ96FC7 376 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 COQ2Q96H96 371 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 ABHD14BQ96IU4 210 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 RITA1Q96K30 269 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 AQP10Q96PS8 301 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 RARRES2Q99969 163 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 ARL6Q9H0F7 186 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 C11orf68Q9H3H3 251 aaKnown RBP5.03□□□□□ -1.6
CHD3-213ENST00000571249 ZC4H2Q9NQZ6 224 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 CALYQ9NYX4 217 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 MBD2Q9UBB5 411 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 UBQLN2Q9UHD9 624 aa5.03□□□□□ -1.6
CHD3-213ENST00000571249 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 KIR2DL5BA0A0G2JN68 375 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 KIR2DL5BA0A0G2JPC4 375 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 MPTX1A8MV57 137 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 FAM25EA8MYX2 175 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 HSPB6O14558 160 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 BET1O15155 118 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 PGLYRP1O75594 196 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 IGLV2-14P01704 120 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 PET100P0DJ07 73 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 EGR2P11161 476 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 SLC25A6P12236 298 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 F2RP25116 425 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 CRIP2P52943 208 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 AP2S1P53680 142 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 FXYD4P59646 89 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 TMEM267Q0VDI3 215 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 C5orf64Q2M2E5 130 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 IAH1Q2TAA2 248 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 C6orf183Q5T699 404 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 UNQ5815/PRO19632Q6UWF5 114 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 UBE2DNLQ8IWF7 75 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 CMTM1Q8IZ96 169 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 KIR2DL5AQ8N109 375 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 ZNF565Q8N9K5 539 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 INO80EQ8NBZ0 244 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 SLC24A4Q8NFF2 622 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 OR10V1Q8NGI7 309 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 KIR2DL5BQ8NHK3 375 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 LHFPL5Q8TAF8 219 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 TP53RKQ96S44 253 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 SCRT1Q9BWW7 348 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 C11orf1Q9H5F2 150 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 TAF9BQ9HBM6 251 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 CCL28Q9NRJ3 127 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 FAM212BQ9NTI7 297 aaPredicted RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 RDH8Q9NYR8 311 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 PEF1Q9UBV8 284 aaKnown RBP5.02□□□□□ -1.61
CHD3-213ENST00000571249 KIF25Q9UIL4 384 aa5.02□□□□□ -1.61
CHD3-213ENST00000571249 MARCH11A6NNE9 402 aa5.01□□□□□ -1.61
CHD3-213ENST00000571249 BMPR1BO00238 502 aa5.01□□□□□ -1.61
CHD3-213ENST00000571249 ITGB1BP1O14713 200 aa5.01□□□□□ -1.61
CHD3-213ENST00000571249 TAAR5O14804 337 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms