RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZNF138P52744 262 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 LRRC10Q5BKY1 277 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 GAFA1Q96PS6 74 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
USP43-202ENST00000570475 ANKHD1Q8IWZ3 2542 aaKnown RBP12.46□□□□□ -0.41
USP43-202ENST00000570475 IGHG3P01860 377 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 MT-ND6P03923 174 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 RNASE2P10153 161 aaKnown RBP12.46□□□□□ -0.41
USP43-202ENST00000570475 CD40P25942 277 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 PRR20EP86478 221 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 PRR20CP86479 221 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 PRR20DP86480 221 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 PRR20BP86481 221 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 PRR20AP86496 221 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 OR4B1Q8NGF8 309 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 NEU1Q99519 415 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 TPSG1Q9NRR2 321 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 TRGV8A0A0C4DH27 118 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 M0QZK8 103 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 PEX7O00628 323 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 HES1Q14469 280 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 PRNTQ86SH4 94 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 NUDT10Q8NFP7 164 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 IGFBPL1Q8WX77 278 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 NUDT11Q96G61 164 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 GNB1LQ9BYB4 327 aa12.46□□□□□ -0.42
USP43-202ENST00000570475 ZNF430Q9H8G1 570 aaPredicted RBP12.46□□□□□ -0.42
USP43-202ENST00000570475 SERTM2A0A1B0GWG4 89 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 SNAI2O43623 268 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 VAMP3Q15836 100 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 C9JCJ5 164 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 P01737 135 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 PPIAL4FP0DN26 164 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 VSTM5A8MXK1 200 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 TNRC18O15417 2968 aaPredicted RBP12.45□□□□□ -0.42
USP43-202ENST00000570475 COL8A1P27658 744 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 LYPD2Q6UXB3 125 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 OR1L4Q8NGR5 311 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 NEUROG1Q92886 237 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 LPAR2Q9HBW0 351 aa12.45□□□□□ -0.42
USP43-202ENST00000570475 FAM87AP0C7U9 286 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 TBR1Q16650 682 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 LOC102724200A0A096LPH7 203 aaPredicted RBP12.44□□□□□ -0.42
USP43-202ENST00000570475 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 UQCR10Q9UDW1 63 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 RNF24Q9Y225 148 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 C20orf202A1L168 122 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 PRSS46E5RG02 174 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 K7EM74 188 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 PRRG2O14669 202 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 LINC00310P59036 64 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 OR4C13Q8NGP0 309 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 TSKUQ8WUA8 353 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 DDB2Q92466 427 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 CLEC7AQ9BXN2 247 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 TP73-AS1Q9UF72 201 aa12.44□□□□□ -0.42
USP43-202ENST00000570475 FAM90A9PA6NNJ1 464 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 DLEU1O43261 78 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 UNQ5815/PRO19632Q6UWF5 114 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 SEM1Q6ZVN7 128 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
USP43-202ENST00000570475 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 IGF2RP11717 2491 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
USP43-202ENST00000570475 PPOXP50336 477 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
USP43-202ENST00000570475 IGHV3OR16-8A0A075B7F1 116 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 KIR2DL5BA0A0G2JN68 375 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 KIR2DL5BA0A0G2JPC4 375 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 TMEM11P17152 192 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 TMEM200BQ69YZ2 307 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 KIR2DL5AQ8N109 375 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 MUC6Q6W4X9 2439 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 ARHGAP32A7KAX9 2087 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 CBY3A6NI87 242 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 BSPH1Q075Z2 132 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 C1orf174Q8IYL3 243 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
USP43-202ENST00000570475 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms