RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 KIAA1109Q2LD37 5005 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 HELTA6NFD8 242 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 CEBPZOSA8MTT3 80 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 M0R2N4 97 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 IGKV3-20P01619 116 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 IL4P05112 153 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 HNRNPCP07910 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR10J1P30954 320 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 RPL5P46777 297 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 EMP1P54849 157 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 TCTAP57738 103 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 FXYD7P58549 80 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 SPCS3P61009 180 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 USF2Q15853 346 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 C12orf74Q32Q52 190 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 BSXQ3C1V8 233 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 STEAP1BQ6NZ63 245 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 SELENOHQ8IZQ5 122 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 CSNK1G2-AS1Q8NCQ2 148 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 Q8WTZ3 238 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 GLYATL2Q8WU03 294 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM170AQ8WVE7 144 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 GPR146Q96CH1 333 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 ACY3Q96HD9 319 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 RTBDNQ9BSG5 229 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 HRH4Q9H3N8 390 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 U3KQE9 123 aa6.21□□□□□ -1.42
CTDNEP1-203ENST00000570385 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TRAV30A0A087WSZ9 112 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 DEFB131BA0A096LNP1 70 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 RPS10-NUDT3A0A1W2PQS6 291 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 CDS2O95674 445 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 CD74P04233 296 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 ZNF182P17025 639 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 HTR2BP41595 481 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 EIF2B2P49770 351 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TAS2R19P59542 299 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM41BQ5BJD5 291 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM268Q5VZI3 342 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 C16orf54Q6UWD8 224 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM229BQ8NBD8 167 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 SLC24A4Q8NFF2 622 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR1S2Q8NGQ3 325 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 NPIPB3Q92617 1050 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM222Q9H0R3 208 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 NAA60Q9H7X0 242 aa6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 C14orf166Q9Y224 244 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-203ENST00000570385 IGHV3OR16-12A0A075B7B8 117 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 FAM90A26D6RGX4 464 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 RGS5O15539 181 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 RD3LP0DJH9 198 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 TBPP20226 339 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 CTF1Q16619 201 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 C2orf83Q53S99 150 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 GPR107Q5VW38 600 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR52E5Q8NH55 327 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 RNASEH2CQ8TDP1 164 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 AP3S1Q92572 193 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 RBPMSQ93062 196 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 LINC00052Q96N35 136 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 PBDC1Q9BVG4 233 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 MIXL1Q9H2W2 232 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 PLA2G2EQ9NZK7 142 aa6.19□□□□□ -1.42
CTDNEP1-203ENST00000570385 MUC4Q99102 2169 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 H3BMM0 161 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 CTDSP2O14595 271 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 BUB3O43684 328 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 IFNA10P01566 189 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 PSG1P11464 419 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 SLC25A4P12235 298 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 NPY1RP25929 384 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 AP2S1P53680 142 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 SIGLEC15Q6ZMC9 328 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 FAM219AQ8IW50 185 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 RNF126Q9BV68 326 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 NRN1Q9NPD7 142 aa6.18□□□□□ -1.42
CTDNEP1-203ENST00000570385 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 IGLV2-18A0A075B6J9 118 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 CRYM-AS1A6NIL9 109 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 DISC1C4P0D8 188 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 GABARAPH6UMI1 98 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 B3GALNT1O75752 331 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 GABARAPO95166 117 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 TOMM40O96008 361 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 SMIM18P0DKX4 95 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 NUTF2P61970 127 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 ZNF90Q03938 601 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 POM121L12Q8N7R1 296 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms