RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SRSF4Q08170 494 aaKnown RBP5.43□□□□□ -1.54
SMG1-217ENST00000569764 ARFRP1Q13795 201 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 SLC25A42Q86VD7 318 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 EXOC3-AS1Q8N2X6 119 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 VN1R17PQ8TDU5 208 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 TMED6Q8WW62 240 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 MALSU1Q96EH3 234 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 BPESC1Q9GZL8 116 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
SMG1-217ENST00000569764 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 IGHV3-13P01766 116 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 VSIG10L2P0DP72 767 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 FGF6P10767 208 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 HIST1H3AP68431 136 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 PMVKQ15126 192 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 AMMECR1LQ6DCA0 310 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 PRADC1Q9BSG0 188 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 TUBA4BQ9H853 241 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 KCNIP2Q9NS61 270 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 GTF3C1Q12789 2109 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 ZNF593O00488 134 aaPredicted RBP5.42□□□□□ -1.54
SMG1-217ENST00000569764 PIN1P1O15428 100 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 EDNRAP25101 427 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 KIAA1644Q3SXP7 199 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 ASPHD1Q5U4P2 390 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 ZNF695Q8IW36 515 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 OR10AC1Q8NH08 325 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 CYYR1Q96J86 154 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 INAFM1C9JVW0 142 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 TMEM178BH3BS89 294 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 TNFSF13O75888 250 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 OR2H2O95918 312 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 VDAC2P45880 294 aaPredicted RBP5.42□□□□□ -1.54
SMG1-217ENST00000569764 FAM106AQ4KMX7 169 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 GATD1Q8NB37 220 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 ITLN1Q8WWA0 313 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 GPX7Q96SL4 187 aaPredicted RBP5.42□□□□□ -1.54
SMG1-217ENST00000569764 FREM1Q5H8C1 2179 aa5.42□□□□□ -1.54
SMG1-217ENST00000569764 IFITM10A6NMD0 228 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 PGAM2P15259 253 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 GYPEP15421 78 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 HOXD3P31249 432 aaPredicted RBP5.41□□□□□ -1.54
SMG1-217ENST00000569764 DHRS2Q13268 280 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 GFI1BQ5VTD9 330 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 ZNF709Q8N972 641 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 TMEM229BQ8NBD8 167 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SLAMF6Q96DU3 332 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 TRDV1A0A1B0GX56 115 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 E7EQL1 145 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 J3QT63 122 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SLC25A1P53007 311 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 HIST3H3Q16695 136 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 TTC32Q5I0X7 151 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 DEFB121Q5J5C9 76 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 C10orf128Q5T292 105 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SGPP2Q8IWX5 399 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 ZNF525Q8N782 197 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 OR11H7Q8NGC8 314 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SOSTQ9BQB4 213 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 TMEM147Q9BVK8 224 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 U3KQE9 123 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 ZNF407Q9C0G0 2248 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 APOC4P55056 127 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 DGCR2P98153 550 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 C1QL2Q7Z5L3 287 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 WFDC11Q8NEX6 87 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 PRR25Q96S07 402 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 SRXN1Q9BYN0 137 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 AK3Q9UIJ7 227 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 H7C1H1 209 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 M0R1W7 72 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 HERV-K104P61576 105 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 TMEM54Q969K7 222 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 NRN1Q9NPD7 142 aa5.41□□□□□ -1.54
SMG1-217ENST00000569764 MTORP42345 2549 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 DEDDO75618 318 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 GATA1P15976 413 aaPredicted RBP5.4□□□□□ -1.54
SMG1-217ENST00000569764 CTLA4P16410 223 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 LMO1P25800 156 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 GPR183P32249 361 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 UBE2E1P51965 193 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 TNP2Q05952 138 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 PNRC1Q12796 327 aaPredicted RBP5.4□□□□□ -1.54
SMG1-217ENST00000569764 MINOS1Q5TGZ0 78 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 BCL6BQ8N143 479 aaPredicted RBP5.4□□□□□ -1.54
SMG1-217ENST00000569764 KLF14Q8TD94 323 aaPredicted RBP5.4□□□□□ -1.54
SMG1-217ENST00000569764 DYNLRB2Q8TF09 96 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 UBE2E2Q96LR5 201 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 RTBDNQ9BSG5 229 aaPredicted RBP5.4□□□□□ -1.54
SMG1-217ENST00000569764 TNFRSF19Q9NS68 423 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 COMMD9Q9P000 198 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 UQCR10Q9UDW1 63 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 MINOS1-NBL1R4GNA1 71 aa5.4□□□□□ -1.54
SMG1-217ENST00000569764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.4□□□□□ -1.545e-33■■■■■ 121.4
SMG1-217ENST00000569764 DOCK7Q96N67 2140 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 NDUFB4O95168 129 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms