RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 IGKV1-17P01599 117 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 IAPPP10997 89 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 BMI1P35226 326 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 RND2P52198 227 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 RAB11AP62491 216 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 RPP30P78346 268 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 ZNF846Q147U1 533 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 TIGITQ495A1 244 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 OR1S2Q8NGQ3 325 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 RNF2Q99496 336 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 ZMAT4Q9H898 229 aa10.35□□□□□ -0.75
HERPUD1-218ENST00000569569 TRAV6A0A075B6T7 132 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 FAM240BA0A1B0GVZ2 78 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 OR10J1P30954 320 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 ID3Q02535 119 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 MZT2BQ6NZ67 158 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 Q8WTZ3 238 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 NPIPB3Q92617 1050 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
HERPUD1-218ENST00000569569 MPTX1A8MV57 137 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 WRBO00258 174 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 CD5P06127 495 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 NPPCP23582 126 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 HAGHQ16775 308 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 WWC2-AS2Q96NR7 200 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 METTL26Q96S19 204 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 NUDT15Q9NV35 164 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
HERPUD1-218ENST00000569569 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 A0A1W2PS18 150 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 OR4C46A6NHA9 309 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 UPK1BO75841 260 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 ASAH1Q13510 395 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 SLC35E1Q96K37 410 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 RCHY1Q96PM5 261 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 TMEM231Q9H6L2 316 aa10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 PAIP2BQ9ULR5 123 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-218ENST00000569569 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 LCE2BO14633 110 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 TOMM40O96008 361 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 CRYBB3P26998 211 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 POLR2GP62487 172 aaKnown RBP eCLIP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 PAFAH1B2P68402 229 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 GAMTQ14353 236 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 IAH1Q2TAA2 248 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 SPANXN5Q5MJ07 72 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 TCF24Q7RTU0 167 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 LILRB2Q8N423 598 aa10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-218ENST00000569569 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 DFFBO76075 338 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 RD3LP0DJH9 198 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 CMC4P56277 68 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 ZBTB8BQ8NAP8 495 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 SEC22CQ9BRL7 303 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 PSENENQ9NZ42 101 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 UBQLN2Q9UHD9 624 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 STRAPQ9Y3F4 350 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
HERPUD1-218ENST00000569569 STAB2Q8WWQ8 2551 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 ZFP92A6NM28 416 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 IL4P05112 153 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 PSG1P11464 419 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 IFITM3Q01628 133 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 C12orf45Q8N5I9 185 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 ENKURQ8TC29 256 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 GRAMD2BQ96HH9 432 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 SMIM8Q96KF7 97 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 GSKIPQ9P0R6 139 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 U3KQE9 123 aa10.29□□□□□ -0.76
HERPUD1-218ENST00000569569 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
HERPUD1-218ENST00000569569 LOC102724200A0A096LPH7 203 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms