RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 WIPF1O43516 503 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 SLC25A47Q6Q0C1 308 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 UBALD1Q8TB05 177 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 SMG1Q96Q15 3661 aaKnown RBP8.93□□□□□ -0.98
CLK3-226ENST00000569406 IGLV3-1P01715 115 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 COX6A1P12074 109 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 CR1LQ2VPA4 569 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 OR51H1Q8NH63 302 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 DUX5Q96PT3 197 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
CLK3-226ENST00000569406 CCL4P13236 92 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 ZNF474Q6S9Z5 364 aaPredicted RBP8.92□□□□□ -0.98
CLK3-226ENST00000569406 TEX45Q8NA69 505 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 ADTRPQ96IZ2 230 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 DOCK10Q96BY6 2186 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 SP9P0CG40 484 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 IFITM1P13164 125 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 NMUP48645 174 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 OR5AS1Q8N127 324 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 LRRC29Q8WV35 223 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 HSD17B10Q99714 261 aaKnown RBP8.92□□□□□ -0.98
CLK3-226ENST00000569406 V9GYV3 84 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 CNOT1A5YKK6 2376 aaKnown RBP8.92□□□□□ -0.98
CLK3-226ENST00000569406 ZIC3O60481 467 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 EVI2AP22794 236 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 NMSQ5H8A3 153 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
CLK3-226ENST00000569406 LINC00694P0DN24 101 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 MFAP2P55001 183 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 RPL31P62899 125 aaKnown RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 IBA57Q5T440 356 aaKnown RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 BCL6BQ8N143 479 aaPredicted RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 RDH5Q92781 318 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 LYZL4Q96KX0 146 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 IGKV1-9A0A0C4DH69 117 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 CRXO43186 299 aaPredicted RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 ZFAND5O76080 213 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 NABP1Q96AH0 204 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 ABHD14BQ96IU4 210 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 M0R135 149 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 FCN3O75636 299 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 CCL3P10147 92 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 BCL3P20749 454 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 FXYD2P54710 66 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 EMP1P54849 157 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
CLK3-226ENST00000569406 Q0VFX4 171 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 ASPHD1Q5U4P2 390 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 ZNF799Q96GE5 643 aa8.91□□□□□ -0.98
CLK3-226ENST00000569406 TEX50A0A1B0GTY4 177 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 CCL1P22362 96 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 ZXDAP98168 799 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 MALLQ13021 153 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 SLC35E4Q6ICL7 350 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 OSR2Q8N2R0 312 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 RBMXL3Q8N7X1 1067 aaKnown RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 H1FXQ92522 213 aaKnown RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 NBEAQ8NFP9 2946 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 SYNGR2O43760 224 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 ENSAO43768 121 aaKnown RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
CLK3-226ENST00000569406 SPTSSAQ969W0 71 aa8.9□□□□□ -0.98
CLK3-226ENST00000569406 WIPI1Q5MNZ9 446 aaPredicted RBP8.89□□□□□ -0.99
CLK3-226ENST00000569406 FOXL2NBQ6ZUU3 175 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 ZNF502Q8TBZ5 544 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 C1RLQ9NZP8 487 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 ABCA1O95477 2261 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 A0A0G2JRQ6 117 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 SNCGO76070 127 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 B3GALT5-AS1P59052 145 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 OR4X2Q8NGF9 303 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 PPYP01298 95 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 CD24P25063 80 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 ZNF138P52744 262 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 SRYQ05066 204 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 IL11RAQ14626 422 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 FAM120AOSQ5T036 256 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 Q6ZSR3 168 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 UCN2Q96RP3 112 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 CACNG5Q9UF02 275 aa8.89□□□□□ -0.99
CLK3-226ENST00000569406 TMSB15BA0A087X1C1 80 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 TFF3Q07654 80 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 PIGYQ3MUY2 71 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 ZNF295-AS1Q8N0V1 137 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 GAPTQ8N292 157 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 GJC3Q8NFK1 279 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 GPR179Q6PRD1 2367 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
CLK3-226ENST00000569406 A0A0J9YW62 118 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms