RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 PUS1Q9Y606 427 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLN6-209ENST00000569336 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 A0A1W2PS18 150 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 ZNF785A8K8V0 405 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 ZNF207O43670 478 aaKnown RBP7.38□□□□□ -1.23
CLN6-209ENST00000569336 ADAP1O75689 374 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 UPK1BO75841 260 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 FABP1P07148 127 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 IAPPP10997 89 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 GPX4P36969 197 aaPredicted RBP7.38□□□□□ -1.23
CLN6-209ENST00000569336 NKX2-1P43699 371 aaPredicted RBP7.38□□□□□ -1.23
CLN6-209ENST00000569336 YPEL3P61236 119 aaPredicted RBP7.38□□□□□ -1.23
CLN6-209ENST00000569336 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 ENKURQ8TC29 256 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 ACY3Q96HD9 319 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 GRAMD2BQ96HH9 432 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 RHPN1-AS1Q9BWJ2 59 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 SMPXQ9UHP9 88 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 U3KQK5 164 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
CLN6-209ENST00000569336 OR11H12B2RN74 326 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 CHEK1O14757 476 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 IGKV1-17P01599 117 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 CD7P09564 240 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 NPPCP23582 126 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 NUP62P37198 522 aaPredicted RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 EIF2B2P49770 351 aaKnown RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 DEFA1P59665 94 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 DEFA3P59666 94 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 PAFAH1B2P68402 229 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 IAH1Q2TAA2 248 aaPredicted RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 C11orf87Q6NUJ2 197 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 Q8WTZ3 238 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 FAM110AQ9BQ89 295 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 MAGT1Q9H0U3 335 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 SRD5A3Q9H8P0 318 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 TBC1D24Q9ULP9 559 aa7.37□□□□□ -1.23
CLN6-209ENST00000569336 PAIP2BQ9ULR5 123 aaKnown RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 STRAPQ9Y3F4 350 aaKnown RBP7.37□□□□□ -1.23
CLN6-209ENST00000569336 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
CLN6-209ENST00000569336 ZFP92A6NM28 416 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 SSSCA1O60232 199 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 CMC4P56277 68 aaPredicted RBP7.36□□□□□ -1.23
CLN6-209ENST00000569336 MLANAQ16655 118 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 TIGITQ495A1 244 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 SBSPONQ8IVN8 264 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 OR4D5Q8NGN0 318 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 ZNF431Q8TF32 576 aaPredicted RBP7.36□□□□□ -1.23
CLN6-209ENST00000569336 NPIPB3Q92617 1050 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 RAB40CQ96S21 281 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 RNF2Q99496 336 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 ASCL2Q99929 193 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 PFDN2Q9UHV9 154 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 SELENOKQ9Y6D0 94 aa7.36□□□□□ -1.23
CLN6-209ENST00000569336 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 SCGB1D2O95969 90 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 TOMM40O96008 361 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 IL4P05112 153 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 RD3LP0DJH9 198 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 CRYBB3P26998 211 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 ID3Q02535 119 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 SPANXN5Q5MJ07 72 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 DEFB125Q8N687 156 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 ZBTB8BQ8NAP8 495 aaPredicted RBP7.35□□□□□ -1.23
CLN6-209ENST00000569336 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 ZNF414Q96IQ9 312 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 RCHY1Q96PM5 261 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 TM2D3Q9BRN9 247 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 VSIRQ9H7M9 311 aa7.35□□□□□ -1.23
CLN6-209ENST00000569336 GPN1Q9HCN4 374 aaPredicted RBP7.35□□□□□ -1.23
CLN6-209ENST00000569336 IGHV3OR16-13A0A075B7E8 117 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 IGHV3-74A0A0B4J1X5 117 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 TRAV2A0A0B4J234 112 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 HELTA6NFD8 242 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 H3BP45 60 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 PRAF2O60831 178 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 TSC22D2O75157 780 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 CFDP00746 253 aaPredicted RBP7.34□□□□□ -1.23
CLN6-209ENST00000569336 HNRNPCP07910 306 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLN6-209ENST00000569336 P2RY1P47900 373 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 TAS2R30P59541 319 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 POLR2GP62487 172 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLN6-209ENST00000569336 RPL11P62913 178 aaKnown RBP7.34□□□□□ -1.23
CLN6-209ENST00000569336 AKR1C1Q04828 323 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 GAMTQ14353 236 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 C12orf45Q8N5I9 185 aaPredicted RBP7.34□□□□□ -1.23
CLN6-209ENST00000569336 OR51G1Q8NGK1 321 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 RNF125Q96EQ8 232 aa7.34□□□□□ -1.23
CLN6-209ENST00000569336 SMIM8Q96KF7 97 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms