RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 TRBV12-3P01733 135 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 S100A11P31949 105 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 RND2P52198 227 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 HBG1P69891 147 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 HBG2P69892 147 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 DLK1P80370 383 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 SLC38A11Q08AI6 406 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 VWC2Q2TAL6 325 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 FAM209BQ5JX69 171 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 CLEC19AQ6UXS0 136 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 INO80EQ8NBZ0 244 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-212ENST00000568539 KLHL30-AS1Q8NEE0 82 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 NPIPB3Q92617 1050 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 ACY3Q96HD9 319 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 SLC35E1Q96K37 410 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
SF3B3-212ENST00000568539 IGKV1OR2-108A0A075B7D4 117 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 OR2T8A6NH00 312 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 NUDT19A8MXV4 375 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 GNG7O60262 68 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 PFDN1O60925 122 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 CLN5O75503 358 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 CLEC3BP05452 202 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 CTSGP08311 255 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 GPR183P32249 361 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 ADMP35318 185 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 NUP62P37198 522 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-212ENST00000568539 NPBWR1P48145 328 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 ATP6V1FQ16864 119 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 DEFB136Q30KP8 78 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 NSUN5P1Q3KNT7 163 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 ZFP69Q49AA0 526 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 Q56UQ5 140 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 TMEM144Q7Z5S9 345 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 UBAC2Q8NBM4 344 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 OR1S2Q8NGQ3 325 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 OR5C1Q8NGR4 320 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 HYLS1Q96M11 299 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 MFFQ9GZY8 342 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 ZC4H2Q9NQZ6 224 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
SF3B3-212ENST00000568539 GAR1Q9NY12 217 aaKnown RBP6.51□□□□□ -1.37
SF3B3-212ENST00000568539 PEF1Q9UBV8 284 aaKnown RBP6.51□□□□□ -1.37
SF3B3-212ENST00000568539 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 A0A087WW49 117 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 SMCO3A2RU48 225 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 PPP5D1E7EU14 171 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 BMPR1BO00238 502 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 TGOLN2O43493 480 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 IGKV1-17P01599 117 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 HSPB1P04792 205 aaKnown RBP6.5□□□□□ -1.37
SF3B3-212ENST00000568539 IGLC1P0CG04 106 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 CXCL2P19875 107 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 OR10J1P30954 320 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 ARL3P36405 182 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 AP2S1P53680 142 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-212ENST00000568539 AKR1C1Q04828 323 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 OR2F1Q13607 317 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 ZNF345Q14585 488 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 CLINT1Q14677 625 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 KCNRGQ8N5I3 272 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 OR1N2Q8NGR9 330 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 DUX3Q96PT4 197 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 ATP5SQ99766 215 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 CHRDL1Q9BU40 450 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 SMIM3Q9BZL3 60 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 WFDC1Q9HC57 220 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 NPVFQ9HCQ7 196 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 FBXL17Q9UF56 701 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 LSM4Q9Y4Z0 139 aaKnown RBP6.5□□□□□ -1.37
SF3B3-212ENST00000568539 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
SF3B3-212ENST00000568539 TRAV30A0A087WSZ9 112 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 UBE2L5PA0A1B0GUS4 154 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 ZFP92A6NM28 416 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 CCL24O00175 119 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 NUPL2O15504 423 aaKnown RBP6.49□□□□□ -1.37
SF3B3-212ENST00000568539 GGCTO75223 188 aaKnown RBP6.49□□□□□ -1.37
SF3B3-212ENST00000568539 DFFBO76075 338 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 EIF2B2P49770 351 aaKnown RBP6.49□□□□□ -1.37
SF3B3-212ENST00000568539 ZNF616Q08AN1 781 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 FHL3Q13643 280 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 TIGITQ495A1 244 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 TEPPQ6URK8 271 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 OR11H1Q8NG94 326 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 RYR3Q15413 4870 aa6.49□□□□□ -1.37
SF3B3-212ENST00000568539 TET2Q6N021 2002 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-212ENST00000568539 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
SF3B3-212ENST00000568539 A0A0D9SG52 128 aa6.48□□□□□ -1.37
SF3B3-212ENST00000568539 LINC01619G3V211 115 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms