RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 CEMP1Q6PRD7 247 aaPredicted RBP8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 OR11H2Q8NH07 326 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 TMEM231Q9H6L2 316 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 TMEM56-RWDD3S4R434 201 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 AGRNO00468 2067 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 RPS10-NUDT3A0A1W2PQS6 291 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 A0A1W2PS18 150 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 IFNA10P01566 189 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 NPY1RP25929 384 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 CRYBB3P26998 211 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 OR10J1P30954 320 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 NANOS2P60321 138 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 GSG1LQ6UXU4 331 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 Q8WTZ3 238 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 NPIPB3Q92617 1050 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 FBXL17Q9UF56 701 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 RSL24D1Q9UHA3 163 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 SCP2D1Q9UJQ7 156 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 KCNIP3Q9Y2W7 256 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
GTF3C1-208ENST00000567843 VPS13DQ5THJ4 4388 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 TRAV30A0A087WSZ9 112 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 CCDC160A6NGH7 325 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 K7EQG2 157 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 SCGB2A1O75556 95 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 CD5P06127 495 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 DHRS2Q13268 280 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 USF2Q15853 346 aaPredicted RBP8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 TMED4Q7Z7H5 227 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 STHQ8IWL8 128 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 TMEM217Q8N7C4 229 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 OR1S2Q8NGQ3 325 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 PHLDA1Q8WV24 401 aaPredicted RBP8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 NARS2Q96I59 477 aaKnown RBP8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 SOSTQ9BQB4 213 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 RBKSQ9H477 322 aa8.94□□□□□ -0.98
GTF3C1-208ENST00000567843 IL4P05112 153 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 HNRNPCP07910 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 SLC25A4P12235 298 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 PYDC2Q56P42 97 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 NMSQ5H8A3 153 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 OR1S1Q8NH92 325 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 RNASEH2CQ8TDP1 164 aaKnown RBP8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 GATAD1Q8WUU5 269 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 GRAMD2BQ96HH9 432 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 BCL7BQ9BQE9 202 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 CLEC5AQ9NY25 188 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 RABL2AQ9UBK7 228 aaPredicted RBP8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 RABL2BQ9UNT1 228 aa8.93□□□□□ -0.98
GTF3C1-208ENST00000567843 TRAV2A0A0B4J234 112 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 A0A0B4J2A0 478 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 IFNA4P05014 189 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 RD3LP0DJH9 198 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 CCR6P51684 374 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 KLF9Q13886 244 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 ACTL10Q5JWF8 245 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 C16orf54Q6UWD8 224 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 LGI3Q8N145 548 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 OR51G1Q8NGK1 321 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 IL22RA2Q969J5 263 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 SCGB3A2Q96PL1 93 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 PBDC1Q9BVG4 233 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 SHPKQ9UHJ6 478 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 PAIP2BQ9ULR5 123 aaKnown RBP8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 KLK5Q9Y337 293 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 U3KQE9 123 aa8.92□□□□□ -0.98
GTF3C1-208ENST00000567843 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 IAPPP10997 89 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 PSG1P11464 419 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 ANXA3P12429 323 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 C4BPBP20851 252 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 ETFRF1Q6IPR1 90 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 TOMM5Q8N4H5 51 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 GLMPQ8WWB7 406 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
GTF3C1-208ENST00000567843 HELTA6NFD8 242 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 DEDDO75618 318 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 TOMM40O96008 361 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 VAMP1P23763 118 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 DEFB1P60022 68 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 ZNF90Q03938 601 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 OR2F1Q13607 317 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 NOXA1Q86UR1 476 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 TRIM63Q969Q1 353 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 RAB40CQ96S21 281 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 U3KQ87 197 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms