RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 FKBP1AP62942 108 aaKnown RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 DHRS2Q13268 280 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST2H2BEQ16778 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 KRTAP21-3Q3LHN1 58 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 BRMS1LQ5PSV4 323 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 LDLRAD2Q5SZI1 272 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 AADACL3Q5VUY0 350 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TOMM20LQ6UXN7 152 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 Q6ZR54 194 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 BPIFA4PQ86YQ2 179 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 C12orf45Q8N5I9 185 aaPredicted RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 ZFAND2AQ8N6M9 145 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 OR9Q1Q8NGQ5 310 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 OR5C1Q8NGR4 320 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 CD200R1Q8TD46 325 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 OR5P3Q8WZ94 311 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 H1FXQ92522 213 aaKnown RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BHQ93079 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BNQ99877 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BMQ99879 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HSPB9Q9BQS6 159 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 DOHHQ9BU89 302 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TTTY13Q9BZ97 58 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 PBOV1Q9GZY1 135 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 CACYBPQ9HB71 228 aaKnown RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 SPANXA1Q9NS26 97 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAPPC2LQ9UL33 140 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 FUT9Q9Y231 359 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 LINC00588Q9Y4M8 146 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 E9PCH4 1651 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 MYH2Q9UKX2 1941 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 WDFY4Q6ZS81 3184 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 COL2A1P02458 1487 aaPredicted RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 COL5A2P05997 1499 aaPredicted RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 ANKRD26Q9UPS8 1709 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 C2CD3Q4AC94 2353 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 NCOR2Q9Y618 2525 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 ABCC6O95255 1503 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 ITPR3Q14573 2671 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 TRBV19A0A075B6N1 114 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 C7orf66A4D0T2 115 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 A8MWP6 167 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 TXNDC9O14530 226 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 DEGS1O15121 323 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 PRM2P04554 102 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 COX4I1P13073 169 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 RPL7P18124 248 aaKnown RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 NPPCP23582 126 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 SRIP30626 198 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 NOVP48745 357 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 AP1S1P61966 158 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 FUT5Q11128 374 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 HTR4Q13639 388 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 Q5W150 140 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 RPL22L1Q6P5R6 122 aaKnown RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 SLC25A34Q6PIV7 304 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF322Q6U7Q0 402 aaPredicted RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 TMEM86AQ8N2M4 240 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 SPANXA2-OT1Q8N9U9 137 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 OR10D4PQ8NGN7 298 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 RNASE11Q8TAA1 199 aaKnown RBP2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 PLEKHB2Q96CS7 222 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 CAPZA3Q96KX2 299 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 SEC22CQ9BRL7 303 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 C20orf27Q9GZN8 174 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 VCXQ9H320 206 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 RASL12Q9NYN1 266 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 IL36BQ9NZH7 164 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 CKLFQ9UBR5 152 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 JPT1Q9UK76 154 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 BPTFQ12830 3046 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 C4AP0C0L4 1744 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 MYO9AB2RTY4 2548 aa2.14□□□□□ -2.07
HERPUD1-211ENST00000566550 ASPMQ8IZT6 3477 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV1OR2-108A0A075B7D4 117 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 A0A087WUU8 490 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 MDFIC2A0A1B0GVS7 189 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 C19orf71A6NCJ1 209 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 A8MUU9 505 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 LEPROTO15243 131 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 LY6HO94772 140 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF286BP0CG31 522 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 OGNP20774 298 aaKnown RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 RPS4Y1P22090 263 aaKnown RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 NFYBP25208 207 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 S100A4P26447 101 aaKnown RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 HLA-DMBP28068 263 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 CMPK1P30085 196 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 RPL27AP46776 148 aaKnown RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 SRP9P49458 86 aaKnown RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 VEGFCP49767 419 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF80P51504 273 aaPredicted RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 KLF3P57682 345 aaPredicted RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 TAS2R30P59541 319 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 TAS2R20P59543 309 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 SMIM21Q3B7S5 101 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms