RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 TMEM231Q9H6L2 316 aa7.43□□□□□ -1.22
CNOT1-208ENST00000565697 SRD5A3Q9H8P0 318 aa7.43□□□□□ -1.22
CNOT1-208ENST00000565697 HSPB7Q9UBY9 170 aa7.43□□□□□ -1.22
CNOT1-208ENST00000565697 IGHV3OR16-8A0A075B7F1 116 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 A0A1W2PS18 150 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 FAM90A26D6RGX4 464 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 CHEK1O14757 476 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 ZNF207O43670 478 aaKnown RBP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 MED6O75586 246 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 NDUFB6O95139 128 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 PAFAH1B2P68402 229 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 PPP1R1AQ13522 171 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 TOMM20LQ6UXN7 152 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 LINC00322Q6ZN03 302 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 LINC00299Q6ZSB3 139 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 OR1S2Q8NGQ3 325 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 NARS2Q96I59 477 aaKnown RBP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 RBKSQ9H477 322 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 FNDC4Q9H6D8 234 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 PUS1Q9Y606 427 aaKnown RBP eCLIP7.42□□□□□ -1.22
CNOT1-208ENST00000565697 SELENOKQ9Y6D0 94 aa7.42□□□□□ -1.22
CNOT1-208ENST00000565697 C3orf84H3BNL1 204 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 NXPH3O95157 252 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 IL7P13232 177 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 NPPCP23582 126 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 MLANAQ16655 118 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 COQ8AQ8NI60 647 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 Q8WTZ3 238 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 CIB3Q96Q77 187 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-208ENST00000565697 METTL26Q96S19 204 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 RNF2Q99496 336 aa7.41□□□□□ -1.22
CNOT1-208ENST00000565697 SDHCQ99643 169 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-208ENST00000565697 LOC102724200A0A096LPH7 203 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-208ENST00000565697 LINC00854A0A1B0GVQ3 168 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 C9orf170A2RU37 121 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 PITX3O75364 302 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 IFNA21P01568 189 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 IFNA4P05014 189 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 HOXB5P09067 269 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 OR10J1P30954 320 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 RND2P52198 227 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 YPEL3P61236 119 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-208ENST00000565697 RAB11AP62491 216 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 PRSS54Q6PEW0 395 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 GRAMD2BQ96HH9 432 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 ZNF414Q96IQ9 312 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 GGTLC1Q9BX51 225 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 WFDC10AQ9H1F0 79 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
CNOT1-208ENST00000565697 IGHV3-49A0A0A0MS15 119 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 TRAV2A0A0B4J234 112 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 RBMY1BA6NDE4 496 aaKnown RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 RBMY1EA6NEQ0 496 aaKnown RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 DNASE2O00115 360 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 OR4E1P0C645 316 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 RBMY1DP0C7P1 496 aaKnown RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 IGLC1P0CG04 106 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 EIF2B2P49770 351 aaKnown RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 TIGITQ495A1 244 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 C4orf46Q504U0 113 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 GGNBP1Q5YKI7 109 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 S100ZQ8WXG8 99 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 SLC35E1Q96K37 410 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 CCDC32Q9BV29 185 aa7.39□□□□□ -1.23
CNOT1-208ENST00000565697 MRPL36Q9P0J6 103 aaKnown RBP7.39□□□□□ -1.23
CNOT1-208ENST00000565697 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 WRBO00258 174 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 LYRM1O43325 122 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 SYNGR2O43760 224 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 FABP1P07148 127 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 CRYBB3P26998 211 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 BTCP35070 178 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 APOC4P55056 127 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
CNOT1-208ENST00000565697 DHRS2Q13268 280 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 FAM90A2PQ658T7 463 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 LYG2Q86SG7 212 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 MUC7Q8TAX7 377 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 NPIPB3Q92617 1050 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 ACY3Q96HD9 319 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 KRTAP4-11Q9BYQ6 195 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 UBQLN2Q9UHD9 624 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 PFDN2Q9UHV9 154 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
CNOT1-208ENST00000565697 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
CNOT1-208ENST00000565697 HELTA6NFD8 242 aa7.37□□□□□ -1.23
CNOT1-208ENST00000565697 DFFBO76075 338 aa7.37□□□□□ -1.23
CNOT1-208ENST00000565697 TOMM40O96008 361 aa7.37□□□□□ -1.23
CNOT1-208ENST00000565697 HNRNPCP07910 306 aaKnown RBP eCLIP7.37□□□□□ -1.239e-7■□□□□ 10.7
CNOT1-208ENST00000565697 RD3LP0DJH9 198 aa7.37□□□□□ -1.23
CNOT1-208ENST00000565697 IAPPP10997 89 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms