RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 RND2P52198 227 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 SCGB3A2Q96PL1 93 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 KCNIP3Q9Y2W7 256 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 EPPK1P58107 5090 aaKnown RBP11.47□□□□□ -0.57
CDH3-204ENST00000565453 NUPR2A6NF83 97 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 FABP12A6NFH5 140 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 K7EQG2 157 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 NXPH3O95157 252 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 SLC25A4P12235 298 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 P2RY1P47900 373 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
CDH3-204ENST00000565453 RBMS2Q15434 407 aaKnown RBP11.47□□□□□ -0.57
CDH3-204ENST00000565453 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 CEMP1Q6PRD7 247 aaPredicted RBP11.47□□□□□ -0.57
CDH3-204ENST00000565453 MCFD2Q8NI22 146 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 TRIM63Q969Q1 353 aa11.47□□□□□ -0.57
CDH3-204ENST00000565453 A0A0B4J2A0 478 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 NOL3O60936 208 aaKnown RBP11.46□□□□□ -0.57
CDH3-204ENST00000565453 NPY1RP25929 384 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 CCR6P51684 374 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
CDH3-204ENST00000565453 KLF9Q13886 244 aaPredicted RBP11.46□□□□□ -0.57
CDH3-204ENST00000565453 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 TMEM217Q8N7C4 229 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 DCANP1Q8TF63 244 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 GRAMD2BQ96HH9 432 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 RARRES2Q99969 163 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 MCUBQ9NWR8 336 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 CACFD1Q9UGQ2 172 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 SHPKQ9UHJ6 478 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 RABAC1Q9UI14 185 aa11.46□□□□□ -0.57
CDH3-204ENST00000565453 CA1P00915 261 aaPredicted RBP11.45□□□□□ -0.58
CDH3-204ENST00000565453 AKR1C4P17516 323 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 OR10J1P30954 320 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 Q8WTZ3 238 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 V9GYH0 126 aa11.45□□□□□ -0.58
CDH3-204ENST00000565453 HNRNPCP07910 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDH3-204ENST00000565453 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
CDH3-204ENST00000565453 USF2Q15853 346 aaPredicted RBP11.44□□□□□ -0.58
CDH3-204ENST00000565453 ETFRF1Q6IPR1 90 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 C16orf54Q6UWD8 224 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 TRPT1Q86TN4 253 aaKnown RBP11.44□□□□□ -0.58
CDH3-204ENST00000565453 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 LGI3Q8N145 548 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
CDH3-204ENST00000565453 C11orf68Q9H3H3 251 aaKnown RBP11.44□□□□□ -0.58
CDH3-204ENST00000565453 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CDH3-204ENST00000565453 TOMM40O96008 361 aa11.43□□□□□ -0.58
CDH3-204ENST00000565453 ZNF79Q15937 498 aa11.43□□□□□ -0.58
CDH3-204ENST00000565453 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
CDH3-204ENST00000565453 U3KQ87 197 aa11.43□□□□□ -0.58
CDH3-204ENST00000565453 PITX3O75364 302 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 IFNA10P01566 189 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 IL4P05112 153 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 ANXA3P12429 323 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 SRPXP78539 464 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 STHQ8IWL8 128 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
CDH3-204ENST00000565453 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
CDH3-204ENST00000565453 BIRC6Q9NR09 4857 aa11.42□□□□□ -0.58
CDH3-204ENST00000565453 HELTA6NFD8 242 aa11.41□□□□□ -0.58
CDH3-204ENST00000565453 KNCNA6PVL3 124 aa11.41□□□□□ -0.58
CDH3-204ENST00000565453 LY6G6CO95867 125 aa11.41□□□□□ -0.58
CDH3-204ENST00000565453 PSG1P11464 419 aa11.41□□□□□ -0.58
CDH3-204ENST00000565453 FAUP35544 74 aaKnown RBP11.41□□□□□ -0.58
CDH3-204ENST00000565453 PYDC2Q56P42 97 aa11.41□□□□□ -0.58
CDH3-204ENST00000565453 IGKV1D-37A0A075B6S9 117 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 BUB3O43684 328 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 C4BPBP20851 252 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
CDH3-204ENST00000565453 ATP5IP56385 69 aaPredicted RBP11.4□□□□□ -0.58
CDH3-204ENST00000565453 AP3S2P59780 193 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 NANOS2P60321 138 aaKnown RBP11.4□□□□□ -0.58
CDH3-204ENST00000565453 DHRS2Q13268 280 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 TMEM128Q5BJH2 165 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 MORN3Q6PF18 240 aaPredicted RBP11.4□□□□□ -0.58
CDH3-204ENST00000565453 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 CCDC190Q86UF4 302 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 TOMM5Q8N4H5 51 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 Q8NAQ8 132 aa11.4□□□□□ -0.58
CDH3-204ENST00000565453 RBM38Q9H0Z9 239 aaKnown RBP11.4□□□□□ -0.58
CDH3-204ENST00000565453 SPP1P10451 314 aa11.39□□□□□ -0.59
CDH3-204ENST00000565453 GPX4P36969 197 aaPredicted RBP11.39□□□□□ -0.59
CDH3-204ENST00000565453 AP2S1P53680 142 aaPredicted RBP11.39□□□□□ -0.59
CDH3-204ENST00000565453 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms