RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ZNF891A8MT65 544 aaPredicted RBP16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 URB1-AS1Q96HZ7 61 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SLC25A2Q9BXI2 301 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TECTAO75443 2155 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 Q71RC1 249 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 PRR7Q8TB68 274 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 GAL3ST2Q9H3Q3 398 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SH3BGRL2Q9UJC5 107 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 WNK2Q9Y3S1 2297 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TEX50A0A1B0GTY4 177 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 COX7A2P2O60397 106 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 OR8B3Q8NGG8 313 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 DDB2Q92466 427 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 NPIPB3Q92617 1050 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TMEM70Q9BUB7 260 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SAP30LQ9HAJ7 183 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 RELNP78509 3460 aa16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 LINC00322Q6ZN03 302 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TRGV8A0A0C4DH27 118 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 IGHV1-69-2A0A0G2JMI3 117 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 H0YJW9 148 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MGST3O14880 152 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 PAXXQ9BUH6 204 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SLC25A10Q9UBX3 287 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 IGHV2-70DA0A0C4DH43 119 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MOSP00540 346 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MUC15Q8N387 334 aa16.65■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TOMM40O96008 361 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 SLC25A5P05141 298 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PRB3Q04118 309 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 C17orf58Q2M2W7 97 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FAM167A-AS1Q96KT0 104 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FOXA2Q9Y261 457 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CORO2AQ92828 525 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CCL13Q99616 98 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PEX7O00628 323 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 AKAP6Q13023 2319 aa16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 MRPL36Q9P0J6 103 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-206ENST00000564844 ZZEF1O43149 2961 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 SAA1P0DJI8 122 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 UQCRFS1P47985 274 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PEAR1Q5VY43 1037 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 SPTBN1Q01082 2364 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 A0A1W2PRE2 83 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 RUSC1-AS1Q66K80 236 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 INO80CQ6PI98 192 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FAM216BQ8N7L0 139 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 ITLN1Q8WWA0 313 aa16.63■□□□□ 0.25
MAP1LC3B-206ENST00000564844 TRAV8-1A0A0A6YYK1 113 aa16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PGPA6NDG6 321 aa16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 LEPROTL1O95214 131 aa16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CIDEAO60543 219 aa16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CDKN1BP46527 198 aa16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 MRPL27Q9P0M9 148 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FAM90A9PA6NNJ1 464 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 TAX1BP3O14907 124 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 C1orf185Q5T7R7 199 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 MBD6Q96DN6 1003 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 TPPP3Q9BW30 176 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 IGHV1-24A0A0C4DH33 117 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 C10orf113Q5VZT2 155 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PATE2Q6UY27 113 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 ZNF329Q86UD4 541 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 COMMD5Q9GZQ3 224 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 SRRM5B3KS81 715 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CT45A6P0DMU7 189 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CT45A5P0DMU8 189 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CT45A7P0DMV0 189 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 Q6ZT83 130 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 ZCCHC24Q8N2G6 241 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 RBMXL3Q8N7X1 1067 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 OR1B1Q8NGR6 318 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PPP1R35Q8TAP8 253 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 GRAMD2BQ96HH9 432 aa16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 GSX1Q9H4S2 264 aaPredicted RBP16.61■□□□□ 0.25
MAP1LC3B-206ENST00000564844 C21orf140B9A014 251 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 KLK10O43240 276 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FXYD7P58549 80 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PRCDQ00LT1 54 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 COX19Q49B96 90 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 C9orf106Q8NAJ2 232 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CST9LQ9H4G1 147 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FNDC4Q9H6D8 234 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 UPK2O00526 184 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 APOA2P02652 100 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 DIAPH2-AS1Q14236 149 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 LINC00305Q7Z4B0 112 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 TMEM116Q8NCL8 245 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 ZNF835Q9Y2P0 537 aa16.6■□□□□ 0.25
MAP1LC3B-206ENST00000564844 IGHV1-18A0A0C4DH31 117 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 CD69Q07108 199 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 TEX45Q8NA69 505 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 SYS1-DBNDD2H3BUS1 97 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 IGKV3-15P01624 115 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 FLYWCH2Q96CP2 140 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 HARBI1Q96MB7 349 aa16.59■□□□□ 0.25
MAP1LC3B-206ENST00000564844 PRNDQ9UKY0 176 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms