RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 PAX2Q02962 417 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 ZZEF1O43149 2961 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 J3QW42 95 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 GPR183P32249 361 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 TMEM30CPA0ZSE6 113 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 G3V4G9 280 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 TM4SF5O14894 197 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 SS18L1O75177 396 aaPredicted RBP13.27□□□□□ -0.28
LINC00554-201ENST00000564841 EDDM3AQ14507 147 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 LEAP2Q969E1 77 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 KALRNO60229 2985 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 LGALS7P47929 136 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 ERVK11-1P61568 191 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 C1orf229Q6ZS94 237 aaPredicted RBP13.27□□□□□ -0.29
LINC00554-201ENST00000564841 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 PKIBQ9C010 78 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 DUSP13Q9UII6 198 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 IGKV3D-15A0A087WSY6 115 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20EP86478 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20CP86479 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20DP86480 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20BP86481 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20AP86496 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 COX19Q49B96 90 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PYYP10082 97 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 DUTP33316 252 aaKnown RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 GNG5P63218 68 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 SLC25A40Q8TBP6 338 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 OBP2BQ9NPH6 170 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR33A8MZF0 331 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 PKDREJQ9NTG1 2253 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 MPV17P39210 176 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 FABP6P51161 128 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 OR9G1Q8NH87 305 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 GPR12P47775 334 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 ZNF146Q15072 292 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 UFSP1Q6NVU6 142 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
LINC00554-201ENST00000564841 COL6A6A6NMZ7 2263 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 TACC2O95359 2948 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 PTPRQQ9UMZ3 2332 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 K7EM74 188 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 NCR2O95944 276 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 HTR1DP28221 377 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 ARF6P62330 175 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 HIST1H1AQ02539 215 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 VWA1Q6PCB0 445 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM167BQ9NRX6 74 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 PLAUP00749 431 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 ZNF134P52741 427 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 LINC00322Q6ZN03 302 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 OR4S2Q8NH73 311 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 IDI2-AS1Q9NZ38 188 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 FBLL1A6NHQ2 334 aaKnown RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 RAB31Q13636 194 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PGLYRP4Q96LB8 373 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PTPRBP23467 1997 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PPIAL4GP0DN37 164 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 ASCL5Q7RTU5 278 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TRAV17A0A0B4J275 112 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
LINC00554-201ENST00000564841 SAMD13Q5VXD3 122 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 OR2V2Q96R30 315 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 OR2J3O76001 311 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 FOXC1Q12948 553 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.29
LINC00554-201ENST00000564841 PERPQ96FX8 193 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms