RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MAP1LC3B2A6NCE7 125 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 OR6C6A6NF89 314 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 CSTAP01040 98 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 MAS1P04201 325 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 HMGN2P05204 90 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 PPP1CCP36873 323 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 SRP14P37108 136 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 TPPP2P59282 170 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 S100A10P60903 97 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 SUPT4H1P63272 117 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 CCL20P78556 96 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 BATFQ16520 125 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 IAH1Q2TAA2 248 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 SMIM21Q3B7S5 101 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 BSXQ3C1V8 233 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 ZNF880Q6PDB4 577 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 DNM1P34Q6PK57 102 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 TRAPPC6BQ86SZ2 158 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 LHFPL1Q86WI0 220 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 TMEM156Q8N614 296 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 ZNF676Q8N7Q3 588 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 OR51L1Q8NGJ5 315 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 OR5L1Q8NGL2 311 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 OR10G6Q8NH81 332 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 FNDC9Q8TBE3 224 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 FAM213BQ8TBF2 198 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 TMEM234Q8WY98 164 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 C11orf40Q8WZ69 217 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 GPR146Q96CH1 333 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 SLAMF6Q96DU3 332 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 ZMYND19Q96E35 227 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 GNPNAT1Q96EK6 184 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 KCNS1Q96KK3 526 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 Q96M85 177 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 CDX2Q99626 313 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 SPIN2AQ99865 258 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 SPIN2BQ9BPZ2 258 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 TIMM29Q9BSF4 260 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 RTBDNQ9BSG5 229 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 NUDT9Q9BW91 350 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 MAP1LC3BQ9GZQ8 125 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 GPR84Q9NQS5 396 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 CKLFQ9UBR5 152 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 MRM2Q9UI43 246 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 ZNF443Q9Y2A4 671 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 RBM7Q9Y580 266 aaKnown RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 ANKRD36A6QL64 1941 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 ANKRD31Q8N7Z5 1873 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 KIF26AQ9ULI4 1882 aaPredicted RBP2.75□□□□□ -1.97
CDH1-207ENST00000564745 ZNF236Q9UL36 1845 aa2.75□□□□□ -1.97
CDH1-207ENST00000564745 COL5A3P25940 1745 aaPredicted RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 IGHV1-69-2A0A0G2JMI3 117 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 CXorf51AA0A1B0GTR3 108 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 A0A1B0GV72 72 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 K7EM74 188 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 CORTO00230 105 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 COCHO43405 550 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 NDUFB2O95178 105 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 HRASP01112 189 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 REG1AP05451 166 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 CSN2P05814 226 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 GYPBP06028 91 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 DBIP07108 87 aaKnown RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 RHOCP08134 193 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 OR4Q2P0C623 313 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 ZNF688P0C7X2 276 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 IGLC2P0DOY2 106 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 HIST1H1CP16403 213 aaKnown RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 HMGA1P17096 107 aaKnown RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 PSMB5P28074 263 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 CLDN6P56747 220 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 YPEL3P61236 119 aaPredicted RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 RHOAP61586 193 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 MMDQ15546 238 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 SLC9A3R2Q15599 337 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 OR1Q1Q15612 314 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 TOMM20LQ6UXN7 152 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 ASCL4Q6XD76 172 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 CYP2G1PQ6ZSU1 146 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 LYPD6Q86Y78 171 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 C1orf174Q8IYL3 243 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 OR2T10Q8NGZ9 312 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 PFN4Q8NHR9 129 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 PPTC7Q8NI37 304 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 KLK6Q92876 244 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 REEP6Q96HR9 211 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 OR7D2Q96RA2 312 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 GPX7Q96SL4 187 aaPredicted RBP2.74□□□□□ -1.97
CDH1-207ENST00000564745 NAT8Q9UHE5 227 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 AK3Q9UIJ7 227 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 BTAF1O14981 1849 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 LOC285556D6RIA3 1793 aa2.74□□□□□ -1.97
CDH1-207ENST00000564745 MYO18AQ92614 2054 aaKnown RBP2.73□□□□□ -1.97
CDH1-207ENST00000564745 A0A0C4DFX4 3053 aa2.73□□□□□ -1.97
CDH1-207ENST00000564745 ZSWIM8A7E2V4 1837 aa2.73□□□□□ -1.97
CDH1-207ENST00000564745 PATJQ8NI35 1801 aa2.73□□□□□ -1.97
CDH1-207ENST00000564745 TRAV27A0A087WT01 109 aa2.73□□□□□ -1.97
CDH1-207ENST00000564745 IGHV2-26A0A0B4J1V2 119 aa2.73□□□□□ -1.97
CDH1-207ENST00000564745 A0A0B4J2E0 115 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms