RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.66
CLK3-215ENST00000564353 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 LINC00312Q9Y6C7 94 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 CGB1A6NKQ9 187 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 PRRG2O14669 202 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 TNFRSF1AP19438 455 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 RANP62826 216 aaKnown RBP10.9□□□□□ -0.66
CLK3-215ENST00000564353 CD69Q07108 199 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 GFRALQ6UXV0 394 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 SAMD10Q9BYL1 202 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 DYNLRB1Q9NP97 96 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 MALRD1Q5VYJ5 2156 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 A6NJY4 79 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 M0QZ24 198 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 CCL25O15444 150 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 LY6HO94772 140 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 BRS3P32247 399 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 IGFL3Q6UXB1 125 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 VN1R17PQ8TDU5 208 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 ASCL2Q99929 193 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 PAM16Q9Y3D7 125 aa10.9□□□□□ -0.67
CLK3-215ENST00000564353 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
CLK3-215ENST00000564353 GCGP01275 180 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 ERHP84090 104 aaKnown RBP10.89□□□□□ -0.67
CLK3-215ENST00000564353 TMEM249Q2WGJ8 235 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 TIGITQ495A1 244 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 SLC35E1Q96K37 410 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 SLC25A33Q9BSK2 321 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 NDUFA4L2Q9NRX3 87 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 NAGKQ9UJ70 344 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 COX7A2P2O60397 106 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 AREGP15514 252 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 PMCHP20382 165 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 KIR3DL3Q8N743 410 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 TMEM106BQ9NUM4 274 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 IGF2RP11717 2491 aa10.89□□□□□ -0.67
CLK3-215ENST00000564353 TMEM178BH3BS89 294 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 NDUFB3O43676 98 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 IQCJQ1A5X6 159 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
CLK3-215ENST00000564353 TEX36Q5VZQ5 186 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 ASCL5Q7RTU5 278 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 OR1B1Q8NGR6 318 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 BTF3L4Q96K17 158 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 RAB9BQ9NP90 201 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 COX7A1P24310 79 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 CD24P25063 80 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 KRTDAPP60985 99 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 FAM19A2Q8N3H0 131 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
CLK3-215ENST00000564353 CORTO00230 105 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 POU2AF1Q16633 256 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 OR5B3Q8NH48 314 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 CORO2AQ92828 525 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
CLK3-215ENST00000564353 TMEM167BQ9NRX6 74 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 ZNF257Q9Y2Q1 563 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 ARHGAP32A7KAX9 2087 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 DLL1O00548 723 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
CLK3-215ENST00000564353 YPEL3P61236 119 aaPredicted RBP10.87□□□□□ -0.67
CLK3-215ENST00000564353 IGF2-ASQ6U949 168 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
CLK3-215ENST00000564353 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
CLK3-215ENST00000564353 A0A1W2PRD5 423 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 A0A1W2PRF3 423 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 A0A1W2PRM7 423 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 ISLRO14498 428 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 TNXAQ16473 311 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 LRRC10Q5BKY1 277 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 Q71RC1 249 aaPredicted RBP10.86□□□□□ -0.67
CLK3-215ENST00000564353 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 TNFRSF14Q92956 283 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 C11orf52Q96A22 123 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 S4R3C0 116 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 LOXP28300 417 aaPredicted RBP10.86□□□□□ -0.67
CLK3-215ENST00000564353 GRNP28799 593 aaKnown RBP10.86□□□□□ -0.67
CLK3-215ENST00000564353 SRIP30626 198 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 C10orf113Q5VZT2 155 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 Q8NA96 180 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
CLK3-215ENST00000564353 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
CLK3-215ENST00000564353 NTF3P20783 257 aa10.85□□□□□ -0.67
CLK3-215ENST00000564353 NBL1P41271 181 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms