RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 RND2P52198 227 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 PAX9P55771 341 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 GOSR2O14653 212 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 RLN2P04090 185 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 GAMTQ14353 236 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 UNQ9165/PRO28630Q6UXU0 137 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 OR10P1Q8NGE3 313 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 ZC4H2Q9NQZ6 224 aa12.68□□□□□ -0.38
RNF40-206ENST00000564260 ZNF256Q9Y2P7 627 aaPredicted RBP12.68□□□□□ -0.38
RNF40-206ENST00000564260 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 DLK1P80370 383 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 Q8WTZ3 238 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 NPIPB3Q92617 1050 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 LYRM2Q9NU23 88 aaPredicted RBP12.67□□□□□ -0.38
RNF40-206ENST00000564260 PAIP2BQ9ULR5 123 aaKnown RBP12.67□□□□□ -0.38
RNF40-206ENST00000564260 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
RNF40-206ENST00000564260 DNAH3Q8TD57 4116 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 PMS2P5A8MQ11 134 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 H3BP45 60 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 DEDDO75618 318 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 YIF1AO95070 293 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 TOMM40O96008 361 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 NUP62P37198 522 aaPredicted RBP12.66□□□□□ -0.38
RNF40-206ENST00000564260 RAB32Q13637 225 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 MLANAQ16655 118 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 TOMM20LQ6UXN7 152 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 THAP8Q8NA92 274 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 ACY3Q96HD9 319 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 TRGV9Q99603 122 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 C11orf1Q9H5F2 150 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 TMEM231Q9H6L2 316 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 MRPL36Q9P0J6 103 aaKnown RBP12.66□□□□□ -0.38
RNF40-206ENST00000564260 PFDN2Q9UHV9 154 aa12.66□□□□□ -0.38
RNF40-206ENST00000564260 LSM5Q9Y4Y9 91 aaKnown RBP12.66□□□□□ -0.38
RNF40-206ENST00000564260 PUS1Q9Y606 427 aaKnown RBP eCLIP12.66□□□□□ -0.38
RNF40-206ENST00000564260 E5RGE8 158 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 H2BFSP57053 126 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 S100A10P60903 97 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 DEFA6Q01524 100 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 STX12Q86Y82 276 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 NARS2Q96I59 477 aaKnown RBP12.65□□□□□ -0.38
RNF40-206ENST00000564260 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
RNF40-206ENST00000564260 IGHV3-35A0A0C4DH35 117 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 A0A1W2PS18 150 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 ZFP92A6NM28 416 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 RD3LP0DJH9 198 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 S100A7P31151 101 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 HBG1P69891 147 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 HBG2P69892 147 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 TM4SF20Q53R12 229 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 LAMTOR1Q6IAA8 161 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 ADAMTSL5Q6ZMM2 481 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 ACOT7LQ6ZUV0 252 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 METTL26Q96S19 204 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 C20orf24Q9BUV8 137 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 MED28Q9H204 178 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 NPVFQ9HCQ7 196 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 AURKAIP1Q9NWT8 199 aaPredicted RBP12.64□□□□□ -0.39
RNF40-206ENST00000564260 SMPXQ9UHP9 88 aa12.64□□□□□ -0.39
RNF40-206ENST00000564260 IGHV7-4-1A0A0J9YVY3 117 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 METTL15P1P0C7V9 234 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 GP9P14770 177 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 CRYBB3P26998 211 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 S100A11P31949 105 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 P2RY1P47900 373 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 SULT1A1P50225 295 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 CAV2P51636 162 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 SELENOTP62341 195 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 BAXQ07812 192 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 TIGITQ495A1 244 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 OR8G2PQ6IF36 304 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 OR51G1Q8NGK1 321 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 PPP1R1CQ8WVI7 109 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 SLC25A31Q9H0C2 315 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
RNF40-206ENST00000564260 NPPCP23582 126 aa12.62□□□□□ -0.39
RNF40-206ENST00000564260 BCAP31P51572 246 aa12.62□□□□□ -0.39
RNF40-206ENST00000564260 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
RNF40-206ENST00000564260 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
RNF40-206ENST00000564260 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
RNF40-206ENST00000564260 SPAG8Q99932 426 aaPredicted RBP12.62□□□□□ -0.39
RNF40-206ENST00000564260 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
RNF40-206ENST00000564260 IGKV1D-37A0A075B6S9 117 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 SIX6O95475 246 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 PSG1P11464 419 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 RRAS2P62070 204 aaPredicted RBP12.61□□□□□ -0.39
RNF40-206ENST00000564260 FGL1Q08830 312 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
RNF40-206ENST00000564260 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 TMEM252Q8N6L7 170 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms