RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 DTD1Q8TEA8 209 aa11.8□□□□□ -0.52
RNF40-205ENST00000563909 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
RNF40-205ENST00000563909 ZC4H2Q9NQZ6 224 aa11.8□□□□□ -0.52
RNF40-205ENST00000563909 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 CCSO14618 274 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 SSNA1O43805 119 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 IFNA4P05014 189 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 NKX2-1P43699 371 aaPredicted RBP11.79□□□□□ -0.52
RNF40-205ENST00000563909 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 NOXA1Q86UR1 476 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 CIB3Q96Q77 187 aaPredicted RBP11.79□□□□□ -0.52
RNF40-205ENST00000563909 GSKIPQ9P0R6 139 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 DMRT1Q9Y5R6 373 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 SELENOKQ9Y6D0 94 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 U3KQ87 197 aa11.79□□□□□ -0.52
RNF40-205ENST00000563909 CORTO00230 105 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 WRBO00258 174 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 SYNGR2O43760 224 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
RNF40-205ENST00000563909 MFAP2P55001 183 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 ATP5IP56385 69 aaPredicted RBP11.78□□□□□ -0.52
RNF40-205ENST00000563909 TCTAP57738 103 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 NANOS2P60321 138 aaKnown RBP11.78□□□□□ -0.52
RNF40-205ENST00000563909 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
RNF40-205ENST00000563909 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 C2orf83Q53S99 150 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 ALG5Q9Y673 324 aa11.78□□□□□ -0.52
RNF40-205ENST00000563909 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 BMPR1BO00238 502 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 GOSR2O14653 212 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 IFNA10P01566 189 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 FOLR2P14207 255 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 EDN2P20800 178 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 APOC4P55056 127 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 RPP30P78346 268 aaKnown RBP11.77□□□□□ -0.53
RNF40-205ENST00000563909 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 MAGT1Q9H0U3 335 aa11.77□□□□□ -0.53
RNF40-205ENST00000563909 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
RNF40-205ENST00000563909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.76□□□□□ -0.53
RNF40-205ENST00000563909 RTL8CO15255 209 aa11.76□□□□□ -0.53
RNF40-205ENST00000563909 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
RNF40-205ENST00000563909 IAPPP10997 89 aa11.76□□□□□ -0.53
RNF40-205ENST00000563909 NPY1RP25929 384 aa11.76□□□□□ -0.53
RNF40-205ENST00000563909 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
RNF40-205ENST00000563909 MAPKAPK5-AS1Q8N8E1 139 aa11.76□□□□□ -0.53
RNF40-205ENST00000563909 CYCSP99999 105 aaKnown RBP11.75□□□□□ -0.53
RNF40-205ENST00000563909 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
RNF40-205ENST00000563909 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
RNF40-205ENST00000563909 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
RNF40-205ENST00000563909 ATP6V0BQ99437 205 aa11.75□□□□□ -0.53
RNF40-205ENST00000563909 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
RNF40-205ENST00000563909 MFSD2BA6NFX1 497 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 C2orf70A6NJV1 201 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 IGLL5B9A064 214 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 I3L2K1 104 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 K7EIM0 57 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 UBE2CO00762 179 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 MT-CO2P00403 227 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
RNF40-205ENST00000563909 RAB11AP62491 216 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 C11orf45Q8TAV5 145 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 ZNF502Q8TBZ5 544 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 SMIM8Q96KF7 97 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 TXN2Q99757 166 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 MFFQ9GZY8 342 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 MGAT4CQ9UBM8 478 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 S4R3C0 116 aa11.74□□□□□ -0.53
RNF40-205ENST00000563909 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 RPS10-NUDT3A0A1W2PQS6 291 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 SSSCA1O60232 199 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 SIX6O95475 246 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 IGHV3-23P01764 117 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 OPRK1P41145 380 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 MFAP4P55083 255 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 TAS2R30P59541 319 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 IL15RAQ13261 267 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 TM4SF20Q53R12 229 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 CLEC19AQ6UXS0 136 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 STPG3Q8N7X2 389 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 NMES1Q9C002 83 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 MED28Q9H204 178 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
RNF40-205ENST00000563909 K7EPK0 472 aa11.72□□□□□ -0.53
RNF40-205ENST00000563909 CLEC3BP05452 202 aa11.72□□□□□ -0.53
RNF40-205ENST00000563909 PVALBP20472 110 aaPredicted RBP11.72□□□□□ -0.53
RNF40-205ENST00000563909 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms